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    yejF putative oligopeptide ABC transporter ATP binding subunit YejF [ Escherichia coli str. K-12 substr. MG1655 ]

    Gene ID: 946689, updated on 3-Dec-2024

    Summary

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    Official Symbol
    yejF
    Official Full Name
    putative oligopeptide ABC transporter ATP binding subunit YejF
    Primary source
    ECOCYC:EG12041
    Locus tag
    b2180
    See related
    ASAP:ABE-0007212
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
    Also known as
    ECK2174
    Summary
    YejABEF microcin C ABC transport system. [More information is available at EcoGene: EG12041]. YejF is an ATP-binding component of the YejA/YejB/YejE/YejF ABC transporter. [More information is available at EcoCyc: EG12041].
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    Genomic context

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    Sequence:
    NC_000913.3 (2276300..2277889)

    NC_000913.3Genomic Context describing neighboring genes Neighboring gene putative oligopeptide ABC transporter membrane subunit YejB Neighboring gene putative oligopeptide ABC transporter membrane subunit YejE Neighboring gene protein YejG Neighboring gene multidrug efflux pump Bcr

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_000913.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Characterization of peptide chain length and constituency requirements for YejABEF-mediated uptake of microcin C analogues. Vondenhoff GH, et al. J Bacteriol, 2011 Jul. PMID 21602342, Free PMC Article
    2. The Escherichia coli Yej transporter is required for the uptake of translation inhibitor microcin C. Novikova M, et al. J Bacteriol, 2007 Nov. PMID 17873039, Free PMC Article
    3. Gene fusions and gene duplications: relevance to genomic annotation and functional analysis. Serres MH, et al. BMC Genomics, 2005 Mar 9. PMID 15757509, Free PMC Article
    4. Identification of Escherichia coli genes that are specifically expressed in a murine model of septicemic infection. Khan MA, et al. Infect Immun, 2002 Jul. PMID 12065479, Free PMC Article
    5. A small bacterial RNA regulates a putative ABC transporter. Antal M, et al. J Biol Chem, 2005 Mar 4. PMID 15618228

    See all (13) citations in PubMed

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. An minimal peptide chain length of 6 amino acids and an N-terminal formyl-methionyl-arginyl sequence of microcin C are required for YejABEF-mediated uptake.
      Title: Characterization of peptide chain length and constituency requirements for YejABEF-mediated uptake of microcin C analogues.
    Submit: New GeneRIF Correction

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by EcoCyc

    Function Evidence Code Pubs
    enables ATP binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables ATP binding ISM
    Inferred from Sequence Model
    more info
    		 PubMed 
    enables ATP hydrolysis activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables ATPase-coupled transmembrane transporter activity ISS
    Inferred from Sequence or Structural Similarity
    more info
    		 PubMed 
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    		 PubMed 
    enables transmembrane transporter activity IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    Process Evidence Code Pubs
    involved_in microcin transport IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    acts_upstream_of_or_within microcin transport IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    involved_in oligopeptide transmembrane transport IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    acts_upstream_of_or_within oligopeptide transmembrane transport IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    involved_in peptide transport IEA
    Inferred from Electronic Annotation
    more info
    		  
    involved_in peptide transport NAS
    Non-traceable Author Statement
    more info
    		 PubMed 
    involved_in transmembrane transport IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    part_of ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing NAS
    Non-traceable Author Statement
    more info
    		 PubMed 
    located_in membrane NAS
    Non-traceable Author Statement
    more info
    		 PubMed 
    is_active_in plasma membrane IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    located_in plasma membrane IDA
    Inferred from Direct Assay
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    putative oligopeptide ABC transporter ATP binding subunit YejF
    NP_416685.1

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_000913.3 Reference assembly

      Range
      2276300..2277889
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_416685.1 putative oligopeptide ABC transporter ATP binding subunit YejF [Escherichia coli str. K-12 substr. MG1655]

      See identical proteins and their annotated locations for NP_416685.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A6N8NCG1
      Conserved Domains (1) summary
      PRK15134
      Location:1 → 529
      PRK15134; microcin C ABC transporter ATP-binding protein YejF; Provisional
    Nucleotide Protein
    Heading Accession and Version

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