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    p-cup presidents-cup [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 32727, updated on 9-Dec-2024

    Summary

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    Official Symbol
    p-cupprovided by FlyBase
    Official Full Name
    presidents-cupprovided by FlyBase
    Primary source
    FLYBASE:FBgn0030840
    Locus tag
    Dmel_CG12993
    See related
    AllianceGenome:FB:FBgn0030840
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    CG12993; Dmel\CG12993
    Summary
    Is expressed in elongation stage spermatid and primary spermatocyte. [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    all
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    Genomic context

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    See p-cup in Genome Data Viewer
    Location:
    16A5-16A5; 1-57 cM
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) X NC_004354.4 (17446350..17448774, complement)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) X NC_004354.3 (17340383..17342807, complement)

    Chromosome X - NC_004354.4Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene Endo-beta-N-acetylglucosaminidase Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene long non-coding RNA:CR44692

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Determination of gene expression patterns using in situ hybridization to Drosophila testes. Morris CA, et al. Nat Protoc, 2009. PMID 20010932
    2. Rare recombination events generate sequence diversity among balancer chromosomes in Drosophila melanogaster. Miller DE, et al. Proc Natl Acad Sci U S A, 2016 Mar 8. PMID 26903656, Free PMC Article
    3. Testis single-cell RNA-seq reveals the dynamics of de novo gene transcription and germline mutational bias in Drosophila. Witt E, et al. Elife, 2019 Aug 16. PMID 31418408, Free PMC Article
    4. Single-cell RNA-sequencing reveals pre-meiotic X-chromosome dosage compensation in Drosophila testis. Witt E, et al. PLoS Genet, 2021 Aug. PMID 34403408, Free PMC Article
    5. Prevalence of off-target effects in Drosophila RNA interference screens. Ma Y, et al. Nature, 2006 Sep 21. PMID 16964239

    See all (25) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by FlyBase

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
    		  

    General protein information

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    Preferred Names
    presidents-cup
    Names
    CG12993-PA
    p-cup-PA

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_004354.4 Reference assembly

      Range
      17446350..17448774 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_132988.3 → NP_573216.1  presidents-cup [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_573216.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9VX50
      Related
      FBpp0074211
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9VX50 Q9VX50

    Gene LinkOut

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