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    slp2 sloppy paired 2 [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 33608, updated on 9-Dec-2024

    Summary

    Official Symbol
    slp2provided by FlyBase
    Official Full Name
    sloppy paired 2provided by FlyBase
    Primary source
    FLYBASE:FBgn0004567
    Locus tag
    Dmel_CG2939
    See related
    AllianceGenome:FB:FBgn0004567
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    CG2939; Dmel\CG2939; Dmslp2; FD7; FoxG; Sloppy-paired; slp; Slp; SLP; Slp2
    Summary
    Predicted to enable sequence-specific double-stranded DNA binding activity. Predicted to be involved in regulation of transcription by RNA polymerase II. Predicted to be active in nucleus. Is expressed in several structures, including anlage in statu nascendi; antennal primordium; ganglia; head epidermis primordium; and head segment. Orthologous to human FOXG1 (forkhead box G1). [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
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    Genomic context

    See slp2 in Genome Data Viewer
    Location:
    24C7-24C7; 2-11 cM
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 2L NT_033779.5 (3836840..3839185)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 2L NT_033779.4 (3836840..3839185)

    Chromosome 2L - NT_033779.5Genomic Context describing neighboring genes Neighboring gene long non-coding RNA:CR44077 Neighboring gene sloppy paired 1 Neighboring gene long non-coding RNA:CR44983 Neighboring gene long non-coding RNA:CR45451

    Genomic regions, transcripts, and products

    Pathways from PubChem

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Gene Ontology Provided by FlyBase

    Function Evidence Code Pubs
    enables DNA-binding transcription factor activity IEA
    Inferred from Electronic Annotation
    more info
     
    enables sequence-specific DNA binding IEA
    Inferred from Electronic Annotation
    more info
     
    enables sequence-specific double-stranded DNA binding IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    Process Evidence Code Pubs
    involved_in regulation of DNA-templated transcription IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in regulation of transcription by RNA polymerase II IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    Component Evidence Code Pubs
    is_active_in nucleus IBA
    Inferred from Biological aspect of Ancestor
    more info
     

    General protein information

    Preferred Names
    sloppy paired 2
    Names
    CG2939-PA
    Sloppy-paired
    sloppy pair
    sloppy paired
    sloppy-paired 2
    slp2-PA

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033779.5 Reference assembly

      Range
      3836840..3839185
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_057486.4NP_476834.1  sloppy paired 2 [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_476834.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      P32031, Q8SZ95, Q9VQV5
      UniProtKB/TrEMBL
      H5V8D4
      Related
      FBpp0077189
      Conserved Domains (1) summary
      pfam00250
      Location:180265
      Forkhead; Forkhead domain