U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    Rpn8 Regulatory particle non-ATPase 8 [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 37894, updated on 9-Dec-2024

    Summary

    Official Symbol
    Rpn8provided by FlyBase
    Official Full Name
    Regulatory particle non-ATPase 8provided by FlyBase
    Primary source
    FLYBASE:FBgn0002787
    Locus tag
    Dmel_CG3416
    See related
    AllianceGenome:FB:FBgn0002787
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    CG3416; Dmel\CG3416; l(2)k08003; mov34; Mov34; P26270; p39B; PRSC_DROME; PSMD7; RPN8; S12
    Summary
    Involved in proteasome-mediated ubiquitin-dependent protein catabolic process. Located in dendrite. Part of proteasome regulatory particle. Is expressed in several structures, including adult head; adult heart; embryonic/larval midgut primordium; ganglia; and mesoderm. Used to study congenital heart disease; metabolic dysfunction-associated steatotic liver disease; and neurodegenerative disease. Orthologous to human PSMD7 (proteasome 26S subunit, non-ATPase 7). [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    See Rpn8 in Genome Data Viewer
    Location:
    60C8-60C8; 2-106 cM
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 2R NT_033778.4 (24400028..24404527)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 2R NT_033778.3 (20287551..20292050)

    Chromosome 2R - NT_033778.4Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene muscarinic Acetylcholine Receptor, A-type Neighboring gene long non-coding RNA:CR44813 Neighboring gene Sterile20-like kinase Neighboring gene Serotonin transporter Neighboring gene uncharacterized protein Neighboring gene Phosphatidylinositol glycan anchor biosynthesis class Z

    Genomic regions, transcripts, and products

    Pathways from PubChem

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Gene Ontology Provided by FlyBase

    Function Evidence Code Pubs
    NOT enables metal-dependent deubiquitinase activity IKR
    Inferred from Key Residues
    more info
     
    NOT enables metal-dependent deubiquitinase activity ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    NOT enables peptidase activity IKR
    Inferred from Key Residues
    more info
     
    NOT enables peptidase activity ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    Component Evidence Code Pubs
    located_in dendrite IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    part_of proteasome complex IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    part_of proteasome complex IDA
    Inferred from Direct Assay
    more info
    PubMed 
    part_of proteasome regulatory particle IDA
    Inferred from Direct Assay
    more info
    PubMed 
    part_of proteasome regulatory particle IEA
    Inferred from Electronic Annotation
    more info
     
    part_of proteasome regulatory particle ISS
    Inferred from Sequence or Structural Similarity
    more info
    PubMed 
    part_of proteasome regulatory particle, lid subcomplex ISS
    Inferred from Sequence or Structural Similarity
    more info
    PubMed 

    General protein information

    Preferred Names
    regulatory particle non-ATPase 8
    Names
    CG3416-PA
    CG3416-PB
    CG3416-PC
    Mov34
    Rpn8-PA
    Rpn8-PB
    Rpn8-PC

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033778.4 Reference assembly

      Range
      24400028..24404527
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001274239.1NP_001261168.1  regulatory particle non-ATPase 8, isoform C [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001261168.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      P26270, Q9W178
      UniProtKB/TrEMBL
      A0A0B4KGE6
      Conserved Domains (1) summary
      cd08062
      Location:9290
      MPN_RPN7_8; Mpr1p, Pad1p N-terminal (MPN) domains without catalytic isopeptidase activity, found in 19S proteasomal subunits Rpn7 and Rpn8
    2. NM_079121.3NP_523845.2  regulatory particle non-ATPase 8, isoform A [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_523845.2

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      P26270, Q9W178
      UniProtKB/TrEMBL
      A0A0B4KGE6
      Related
      FBpp0072197
      Conserved Domains (1) summary
      cd08062
      Location:9290
      MPN_RPN7_8; Mpr1p, Pad1p N-terminal (MPN) domains without catalytic isopeptidase activity, found in 19S proteasomal subunits Rpn7 and Rpn8
    3. NM_001274238.1NP_001261167.1  regulatory particle non-ATPase 8, isoform B [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001261167.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A0B4KFH4
      Conserved Domains (2) summary
      cd08062
      Location:9290
      MPN_RPN7_8; Mpr1p, Pad1p N-terminal (MPN) domains without catalytic isopeptidase activity, found in 19S proteasomal subunits Rpn7 and Rpn8
      PLN03246
      Location:7308
      PLN03246; 26S proteasome regulatory subunit; Provisional