U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    Orc3 Origin recognition complex subunit 3 [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 36454, updated on 4-Jan-2025

    Summary

    Official Symbol
    Orc3provided by FlyBase
    Official Full Name
    Origin recognition complex subunit 3provided by FlyBase
    Primary source
    FLYBASE:FBgn0005654
    Locus tag
    Dmel_CG4088
    See related
    AllianceGenome:FB:FBgn0005654
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    CG4088; Dmel\CG4088; DmOrc3; DmORC3; l(2)49Fd; l(2)vr6; lat; Lat; LAT; latheo; ORC; orc3; ORC3; vr-6; vr6
    Summary
    Enables ribonucleoprotein complex binding activity. Involved in DNA replication initiation and positive regulation of border follicle cell migration. Located in nucleus. Part of nuclear origin of replication recognition complex and nuclear pore. Is expressed in adult brain; bouton; centripetal follicle cell; egg chamber; and neuromuscular junction. Orthologous to human ORC3 (origin recognition complex subunit 3). [provided by Alliance of Genome Resources, Jan 2025]
    Orthologs
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    See Orc3 in Genome Data Viewer
    Location:
    49F7-49F8; 2-68 cM
    Exon count:
    9
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 2R NT_033778.4 (13202728..13206547, complement)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 2R NT_033778.3 (9090233..9094052, complement)

    Chromosome 2R - NT_033778.4Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene Lysine demethylase 4B Neighboring gene sequoia Neighboring gene Valyl-tRNA synthetase Neighboring gene uncharacterized protein Neighboring gene FLICE-associated huge protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene aquaporin

    Genomic regions, transcripts, and products

    Pathways from PubChem

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Gene Ontology Provided by FlyBase

    Function Evidence Code Pubs
    enables DNA binding IEA
    Inferred from Electronic Annotation
    more info
     
    enables DNA binding NAS
    Non-traceable Author Statement
    more info
    PubMed 
    enables DNA replication origin binding IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    PubMed 
    enables ribonucleoprotein complex binding IDA
    Inferred from Direct Assay
    more info
    PubMed 
    Process Evidence Code Pubs
    involved_in DNA replication IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in DNA replication NAS
    Non-traceable Author Statement
    more info
    PubMed 
    involved_in DNA replication initiation IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in DNA replication initiation IDA
    Inferred from Direct Assay
    more info
    PubMed 
    involved_in larval feeding behavior NAS
    Non-traceable Author Statement
    more info
    PubMed 
    involved_in learning NAS
    Non-traceable Author Statement
    more info
    PubMed 
    involved_in learning or memory NAS
    Non-traceable Author Statement
    more info
    PubMed 
    involved_in olfactory learning TAS
    Traceable Author Statement
    more info
    PubMed 
    involved_in positive regulation of border follicle cell migration IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    Component Evidence Code Pubs
    part_of DNA replication preinitiation complex IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    part_of nuclear origin of replication recognition complex IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    part_of nuclear origin of replication recognition complex IDA
    Inferred from Direct Assay
    more info
    PubMed 
    part_of nuclear origin of replication recognition complex IEA
    Inferred from Electronic Annotation
    more info
     
    part_of nuclear pore IDA
    Inferred from Direct Assay
    more info
    PubMed 
    part_of nuclear pre-replicative complex IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in nucleus IDA
    Inferred from Direct Assay
    more info
    PubMed 

    General protein information

    Preferred Names
    origin recognition complex subunit 3
    Names
    CG4088-PA
    CG4088-PB
    Orc3-PA
    Orc3-PB
    latheo

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033778.4 Reference assembly

      Range
      13202728..13206547 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_057556.6NP_476904.1  origin recognition complex subunit 3, isoform A [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_476904.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q7K2L1, Q9Y1B4
      Related
      FBpp0086881
      Conserved Domains (2) summary
      pfam07034
      Location:26334
      ORC3_N; Origin recognition complex (ORC) subunit 3 N-terminus
      cd20704
      Location:589721
      Orc3; Origin recognition complex subunit 3
    2. NM_165971.2NP_725260.1  origin recognition complex subunit 3, isoform B [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_725260.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q7K2L1, Q9Y1B4
      Related
      FBpp0086882
      Conserved Domains (2) summary
      pfam07034
      Location:26334
      ORC3_N; Origin recognition complex (ORC) subunit 3 N-terminus
      cd20704
      Location:589721
      Orc3; Origin recognition complex subunit 3