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    ADD1 ADD domain-containing protein 1 [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 36278, updated on 17-Dec-2024

    Summary

    Official Symbol
    ADD1provided by FlyBase
    Official Full Name
    ADD domain-containing protein 1provided by FlyBase
    Primary source
    FLYBASE:FBgn0026573
    Locus tag
    Dmel_CG8290
    See related
    AllianceGenome:FB:FBgn0026573
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    BEST:LD29214; CG8290; dadd1; dAdd1; dADD1; Dmel\CG8290; LD29214
    Summary
    Enables chromatin DNA binding activity and methylated histone binding activity. Involved in regulatory ncRNA-mediated heterochromatin formation. Located in pericentric heterochromatin and polytene chromosome. Is expressed in several structures, including antennal anlage; central brain anlage; central brain primordium; dorsal head epidermis anlage; and ganglia. [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
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    Genomic context

    See ADD1 in Genome Data Viewer
    Location:
    48D5-48D5; 2-65 cM
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 2R NT_033778.4 (11970686..11977721)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 2R NT_033778.3 (7858191..7865226)

    Chromosome 2R - NT_033778.4Genomic Context describing neighboring genes Neighboring gene long non-coding RNA:CR44312 Neighboring gene expansion Neighboring gene Proteasome inhibitor 31 kDa Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene beta1,3-galactosyltransferase 1

    Genomic regions, transcripts, and products

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Gene Ontology Provided by FlyBase

    Function Evidence Code Pubs
    enables chromatin DNA binding IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables chromatin DNA binding IDA
    Inferred from Direct Assay
    more info
    PubMed 
    enables methylated histone binding IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables methylated histone binding IPI
    Inferred from Physical Interaction
    more info
    PubMed 
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    PubMed 
    Process Evidence Code Pubs
    involved_in chromatin remodeling IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in regulatory ncRNA-mediated heterochromatin formation IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in replication fork processing IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    Component Evidence Code Pubs
    located_in heterochromatin IDA
    Inferred from Direct Assay
    more info
    PubMed 
    is_active_in nucleus IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in pericentric heterochromatin IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in pericentric heterochromatin IDA
    Inferred from Direct Assay
    more info
    PubMed 
    located_in polytene chromosome IDA
    Inferred from Direct Assay
    more info
    PubMed 
    located_in polytene chromosome band IDA
    Inferred from Direct Assay
    more info
    PubMed 
    located_in polytene chromosome chromocenter IDA
    Inferred from Direct Assay
    more info
    PubMed 
    located_in polytene chromosome interband IDA
    Inferred from Direct Assay
    more info
    PubMed 

    General protein information

    Preferred Names
    ADD domain-containing protein 1
    Names
    ADD1-PA
    ADD1-PB
    ADD1-PE
    CG8290-PA
    CG8290-PB
    CG8290-PE

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033778.4 Reference assembly

      Range
      11970686..11977721
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_165856.2NP_725094.1  ADD domain-containing protein 1, isoform A [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_725094.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A1Z8R2, Q86PD1
      Related
      FBpp0087148
      Conserved Domains (1) summary
      cd11726
      Location:62164
      ADDz_ATRX; ADDz domain found in ATRX (alpha-thalassemia/mental retardation, X-linked)
    2. NM_136872.3NP_610716.1  ADD domain-containing protein 1, isoform B [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_610716.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q961B8
      Related
      FBpp0087147
      Conserved Domains (3) summary
      smart00595
      Location:758840
      MADF; subfamily of SANT domain
      cd11726
      Location:62164
      ADDz_ATRX; ADDz domain found in ATRX (alpha-thalassemia/mental retardation, X-linked)
      pfam10545
      Location:10341123
      MADF_DNA_bdg; Alcohol dehydrogenase transcription factor Myb/SANT-like
    3. NM_001299394.1NP_001286323.1  ADD domain-containing protein 1, isoform E [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001286323.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A0B4LEU5
      Conserved Domains (3) summary
      smart00595
      Location:612694
      MADF; subfamily of SANT domain
      cd11726
      Location:62164
      ADDz_ATRX; ADDz domain found in ATRX (alpha-thalassemia/mental retardation, X-linked)
      pfam10545
      Location:888977
      MADF_DNA_bdg; Alcohol dehydrogenase transcription factor Myb/SANT-like