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    CG3347 uncharacterized protein [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 33538, updated on 9-Dec-2024

    Summary

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    Official Symbol
    CG3347provided by FlyBase
    Official Full Name
    uncharacterized proteinprovided by FlyBase
    Primary source
    FLYBASE:FBgn0031513
    Locus tag
    Dmel_CG3347
    See related
    AllianceGenome:FB:FBgn0031513
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    Dmel\CG3347
    Summary
    Predicted to enable methylated histone binding activity. Predicted to be involved in positive regulation of DNA-templated transcription. Predicted to be part of Set1C/COMPASS complex. [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    all
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    Genomic context

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    See CG3347 in Genome Data Viewer
    Location:
    23E1-23E1; 2-9 cM
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 2L NT_033779.5 (3269437..3271806)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 2L NT_033779.4 (3269437..3271806)

    Chromosome 2L - NT_033779.5Genomic Context describing neighboring genes Neighboring gene long non-coding RNA:CR45706 Neighboring gene long non-coding RNA:CR44484 Neighboring gene Otopetrin-like b Neighboring gene long non-coding RNA:CR44485

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. glaikit is essential for the formation of epithelial polarity and neuronal development. Dunlop J, et al. Curr Biol, 2004 Nov 23. PMID 15556867
    2. A genome-wide association study for nutritional indices in Drosophila. Unckless RL, et al. G3 (Bethesda), 2015 Jan 12. PMID 25583649, Free PMC Article
    3. Genome-wide association analysis of oxidative stress resistance in Drosophila melanogaster. Weber AL, et al. PLoS One, 2012. PMID 22496853, Free PMC Article
    4. A genome-wide Drosophila screen for heat nociception identifies α2δ3 as an evolutionarily conserved pain gene. Neely GG, et al. Cell, 2010 Nov 12. PMID 21074052, Free PMC Article
    5. Systematic genetic analysis of muscle morphogenesis and function in Drosophila. Schnorrer F, et al. Nature, 2010 Mar 11. PMID 20220848

    See all (20) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by FlyBase

    Function Evidence Code Pubs
    enables methylated histone binding IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    Process Evidence Code Pubs
    involved_in positive regulation of DNA-templated transcription IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    Component Evidence Code Pubs
    part_of Set1C/COMPASS complex IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    part_of Set1C/COMPASS complex IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    uncharacterized protein
    Names
    CG3347-PB
    CG3347-PC

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033779.5 Reference assembly

      Range
      3269437..3271806
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_164530.2 → NP_722887.2  uncharacterized protein Dmel_CG3347, isoform B [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_722887.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q4V587, Q9VQN2
      Conserved Domains (1) summary
      cl22851
      Location:23 → 68
      PHD_SF; PHD finger superfamily

    2. NM_001298650.1 → NP_001285579.1  uncharacterized protein Dmel_CG3347, isoform C [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001285579.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q4V587, Q9VQN2
      Conserved Domains (1) summary
      cl22851
      Location:23 → 68
      PHD_SF; PHD finger superfamily
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9VQN2 Q9VQN2

    Gene LinkOut

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