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    spuD putrescine ABC transporter substrate-binding protein SpuD [ Pseudomonas aeruginosa PAO1 ]

    Gene ID: 880655, updated on 10-Oct-2024

    Summary

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    Gene symbol
    spuD
    Gene description
    putrescine ABC transporter substrate-binding protein SpuD
    Locus tag
    PA0300
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Pseudomonas aeruginosa PAO1 (strain: PAO1)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas
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    Genomic context

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    Sequence:
    NC_002516.2 (338437..339540)

    NC_002516.2Genomic Context describing neighboring genes Neighboring gene glutamine synthetase Neighboring gene aminotransferase Neighboring gene spermidine ABC transporter substrate-binding protein SpuE Neighboring gene polyamine transporter PotG

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_002516.2

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Structural basis of substrate binding specificity revealed by the crystal structures of polyamine receptors SpuD and SpuE from Pseudomonas aeruginosa. Wu D, et al. J Mol Biol, 2012 Mar 9. PMID 22300763
    2. Functional analysis and regulation of the divergent spuABCDEFGH-spuI operons for polyamine uptake and utilization in Pseudomonas aeruginosa PAO1. Lu CD, et al. J Bacteriol, 2002 Jul. PMID 12081945, Free PMC Article
    3. Pseudomonas Genome Database: facilitating user-friendly, comprehensive comparisons of microbial genomes. Winsor GL, et al. Nucleic Acids Res, 2009 Jan. PMID 18978025, Free PMC Article
    4. Defining the Pseudomonas aeruginosa SOS response and its role in the global response to the antibiotic ciprofloxacin. Cirz RT, et al. J Bacteriol, 2006 Oct. PMID 17015649, Free PMC Article
    5. Cystic fibrosis sputum supports growth and cues key aspects of Pseudomonas aeruginosa physiology. Palmer KL, et al. J Bacteriol, 2005 Aug. PMID 16030221, Free PMC Article

    See all (12) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by PseudoCAP

    Function Evidence Code Pubs
    enables putrescine binding IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    Process Evidence Code Pubs
    acts_upstream_of_or_within polyamine transport IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    putrescine ABC transporter substrate-binding protein SpuD
    NP_248991.1
    • Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_002516.2 Reference assembly

      Range
      338437..339540
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_248991.1 putrescine ABC transporter substrate-binding protein SpuD [Pseudomonas aeruginosa PAO1]

      See identical proteins and their annotated locations for NP_248991.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A2R3IUI8
      Conserved Domains (1) summary
      cd13659
      Location:29 → 360
      PBP2_PotF; The periplasmic substrate-binding component of an ABC putrescine transport system and related proteins; contains the type 2 periplasmic-binding fold
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9I6J1.1

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