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    popN type III secretion outer membrane protein PopN [ Pseudomonas aeruginosa PAO1 ]

    Gene ID: 879266, updated on 24-Aug-2024

    Summary

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    Gene symbol
    popN
    Gene description
    type III secretion outer membrane protein PopN
    Locus tag
    PA1698
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Pseudomonas aeruginosa PAO1 (strain: PAO1)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas
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    Genomic context

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    Sequence:
    NC_002516.2 (1847227..1848093)

    NC_002516.2Genomic Context describing neighboring genes Neighboring gene type III secretion system protein Neighboring gene translocation protein in type III secretion Neighboring gene translocation protein in type III secretion Neighboring gene type III secretion system ATPase Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene type III secretory apparatus protein PcrD

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_002516.2

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Regulatory role of PopN and its interacting partners in type III secretion of Pseudomonas aeruginosa. Yang H, et al. J Bacteriol, 2007 Apr. PMID 17237176, Free PMC Article
    2. Polarisation of type III translocation by Pseudomonas aeruginosa requires PcrG, PcrV and PopN. Sundin C, et al. Microb Pathog, 2004 Dec. PMID 15619427
    3. Pseudomonas Genome Database: facilitating user-friendly, comprehensive comparisons of microbial genomes. Winsor GL, et al. Nucleic Acids Res, 2009 Jan. PMID 18978025, Free PMC Article
    4. Defining the Pseudomonas aeruginosa SOS response and its role in the global response to the antibiotic ciprofloxacin. Cirz RT, et al. J Bacteriol, 2006 Oct. PMID 17015649, Free PMC Article
    5. Cystic fibrosis sputum supports growth and cues key aspects of Pseudomonas aeruginosa physiology. Palmer KL, et al. J Bacteriol, 2005 Aug. PMID 16030221, Free PMC Article

    See all (12) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by PseudoCAP

    Function Evidence Code Pubs
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    		 PubMed 
    Process Evidence Code Pubs
    acts_upstream_of_or_within negative regulation of protein secretion IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    acts_upstream_of_or_within protein secretion by the type III secretion system IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    type III secretion outer membrane protein PopN
    NP_250389.1
    • Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_002516.2 Reference assembly

      Range
      1847227..1848093
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_250389.1 type III secretion outer membrane protein PopN [Pseudomonas aeruginosa PAO1]

      See identical proteins and their annotated locations for NP_250389.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      G3XCX6
      Conserved Domains (1) summary
      TIGR02568
      Location:30 → 276
      LcrE; type III secretion regulator YopN/LcrE/InvE/MxiC
    Nucleotide Protein
    Heading Accession and Version

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