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    Rab9Db Rab at 9Db [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 31993, updated on 9-Dec-2024

    Summary

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    Official Symbol
    Rab9Dbprovided by FlyBase
    Official Full Name
    Rab at 9Dbprovided by FlyBase
    Primary source
    FLYBASE:FBgn0030221
    Locus tag
    Dmel_CG9807
    See related
    AllianceGenome:FB:FBgn0030221
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    CG9807; Dmel\CG9807
    Summary
    Predicted to enable GTPase activity. Predicted to be involved in Rab protein signal transduction; endocytic recycling; and exocytosis. Predicted to be located in vesicle. Predicted to be active in cytoplasmic vesicle and plasma membrane. [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

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    See Rab9Db in Genome Data Viewer
    Location:
    9D4-9D4; 1-32 cM
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) X NC_004354.4 (10622355..10623225, complement)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) X NC_004354.3 (10516388..10517258, complement)

    Chromosome X - NC_004354.4Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene X11Lbeta Neighboring gene uncharacterized protein

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Rapidly evolving Rab GTPase paralogs and reproductive isolation in Drosophila. Hutter P. Adv Genet, 2007. PMID 17452244
    2. Regulation of lipid homeostasis by the TBC protein dTBC1D22 via modulation of the small GTPase Rab40 to facilitate lipophagy. Duan X, et al. Cell Rep, 2021 Aug 31. PMID 34469730
    3. A rapidly evolving MYB-related protein causes species isolation in Drosophila. Barbash DA, et al. Proc Natl Acad Sci U S A, 2003 Apr 29. PMID 12695567, Free PMC Article
    4. X-linked small GTPase and OXPHOS genes are candidates for the genetic basis of hybrid inviability in Drosophila. Hutter P. Dev Genes Evol, 2002 Nov. PMID 12424521
    5. Comprehensive functional analysis of Rab GTPases in Drosophila nephrocytes. Fu Y, et al. Cell Tissue Res, 2017 Jun. PMID 28180992, Free PMC Article

    See all (24) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by FlyBase

    Function Evidence Code Pubs
    enables GTP binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables GTPase activity IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    enables GTPase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables GTPase activity ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  
    Process Evidence Code Pubs
    involved_in Rab protein signal transduction ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  
    involved_in endocytic recycling IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    involved_in exocytosis IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    involved_in vesicle-mediated transport ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  
    Component Evidence Code Pubs
    is_active_in endosome IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    is_active_in plasma membrane IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    is_active_in synaptic vesicle IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    is_active_in trans-Golgi network transport vesicle IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    located_in vesicle ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  

    General protein information

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    Preferred Names
    Rab at 9Db
    Names
    CG9807-PA
    Rab GTPase 9Db
    Rab9Db-PA

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_004354.4 Reference assembly

      Range
      10622355..10623225 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_132414.2 → NP_572642.1  Rab at 9Db [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_572642.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      B3DMR9, B3DMX4, Q9W2S9
      Related
      FBpp0071436
      Conserved Domains (2) summary
      smart00175
      Location:8 → 171
      RAB; Rab subfamily of small GTPases
      cd00154
      Location:8 → 167
      Rab; Ras-related in brain (Rab) family of small guanosine triphosphatases (GTPases)
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9W2S9 Q9W2S9

    Gene LinkOut

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