U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    Surf6 Surfeit 6 [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 42370, updated on 9-Dec-2024

    Summary

    Go to the top of the page Help
    Official Symbol
    Surf6provided by FlyBase
    Official Full Name
    Surfeit 6provided by FlyBase
    Primary source
    FLYBASE:FBgn0038746
    Locus tag
    Dmel_CG4510
    See related
    AllianceGenome:FB:FBgn0038746
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    CG4510; Dmel\CG4510
    Summary
    Predicted to enable DNA binding activity and RNA binding activity. Involved in ventral cord development. Predicted to be active in nucleolus. Orthologous to human SURF6 (surfeit 6). [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    all
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See Surf6 in Genome Data Viewer
    Location:
    92B6-92B6; 3-67 cM
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 3R NT_033777.3 (19903665..19904868, complement)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3R NT_033777.2 (15729387..15730590, complement)

    Chromosome 3R - NT_033777.3Genomic Context describing neighboring genes Neighboring gene neither inactivation nor afterpotential E Neighboring gene uncharacterized protein Neighboring gene Caseinolytic protease chaperone subunit Neighboring gene Rho GTPase activating protein at 92B Neighboring gene long non-coding RNA:CR45047 Neighboring gene long non-coding RNA:CR45048

    Genomic regions, transcripts, and products

    Go to the top of the page Help

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Integration of Insulin receptor/Foxo signaling and dMyc activity during muscle growth regulates body size in Drosophila. Demontis F, et al. Development, 2009 Mar. PMID 19211682, Free PMC Article
    2. The Cdc42-selective GAP rich regulates postsynaptic development and retrograde BMP transsynaptic signaling. Nahm M, et al. J Cell Biol, 2010 Nov 1. PMID 21041451, Free PMC Article
    3. Positive regulation of c-Myc by cohesin is direct, and evolutionarily conserved. Rhodes JM, et al. Dev Biol, 2010 Aug 15. PMID 20553708, Free PMC Article
    4. Mammalian and Invertebrate Models as Complementary Tools for Gaining Mechanistic Insight on Muscle Responses to Spaceflight. Cahill T, et al. Int J Mol Sci, 2021 Aug 31. PMID 34502375, Free PMC Article
    5. Absence of N-terminal acetyltransferase diversification during evolution of eukaryotic organisms. Rathore OS, et al. Sci Rep, 2016 Feb 10. PMID 26861501, Free PMC Article

    See all (33) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

    Go to the top of the page Help
    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Go to the top of the page Help

    Homology

    Gene Ontology Provided by FlyBase

    Function Evidence Code Pubs
    enables DNA binding IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    enables RNA binding IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    enables nucleic acid binding ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  
    Process Evidence Code Pubs
    involved_in ribosomal large subunit biogenesis IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    involved_in ribosomal small subunit biogenesis IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    involved_in ribosome biogenesis ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  
    involved_in ventral cord development HMP PubMed 
    Component Evidence Code Pubs
    is_active_in nucleolus IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    located_in nucleolus ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  

    General protein information

    Go to the top of the page Help
    Preferred Names
    surfeit 6
    Names
    CG4510-PA
    Surf6-PA

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033777.3 Reference assembly

      Range
      19903665..19904868 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_079684.4 → NP_524408.1  surfeit 6 [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_524408.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q8MQW1, Q9VDS6
      Related
      FBpp0083263
      Conserved Domains (1) summary
      pfam04935
      Location:179 → 318
      SURF6; Surfeit locus protein 6
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9VDS6.1 Q9VDS6

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Other Literature Sources
    Chemical Information
    Molecular Biology Databases
    Research Materials
    Tools