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    CG6051 uncharacterized protein [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 43271, updated on 9-Dec-2024

    Summary

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    Official Symbol
    CG6051provided by FlyBase
    Official Full Name
    uncharacterized proteinprovided by FlyBase
    Primary source
    FLYBASE:FBgn0039492
    Locus tag
    Dmel_CG6051
    See related
    AllianceGenome:FB:FBgn0039492
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    blr2; Dmel\CG6051
    Summary
    Predicted to enable metal ion binding activity. Predicted to be involved in negative regulation of epidermal growth factor receptor signaling pathway. Predicted to be active in early endosome membrane. Is expressed in several structures, including embryonic hypopharynx; embryonic proventriculus inner layer; embryonic/larval midgut primordium; embryonic/larval posterior spiracle; and gut section. Orthologous to human ZFYVE28 (zinc finger FYVE-type containing 28). [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    all
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    Genomic context

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    See CG6051 in Genome Data Viewer
    Location:
    97E3-97E5; 3-92 cM
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 3R NT_033777.3 (27124759..27151069, complement)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3R NT_033777.2 (22950481..22976791, complement)

    Chromosome 3R - NT_033777.3Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene Malic enzyme b Neighboring gene Gram-positive Specific Serine protease

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Class III phosphatidylinositol-3-OH kinase controls epithelial integrity through endosomal LKB1 regulation. O'Farrell F, et al. Nat Cell Biol, 2017 Dec. PMID 29084199
    2. Integrative genomic analysis reveals novel regulatory mechanisms of eyeless during Drosophila eye development. Yeung K, et al. Nucleic Acids Res, 2018 Dec 14. PMID 30295802, Free PMC Article
    3. Identification of circadian-clock-regulated enhancers and genes of Drosophila melanogaster by transposon mobilization and luciferase reporting of cyclical gene expression. Stempfl T, et al. Genetics, 2002 Feb. PMID 11861563, Free PMC Article
    4. The nucleosome remodeling factor ISWI functionally interacts with an evolutionarily conserved network of cellular factors. Arancio W, et al. Genetics, 2010 May. PMID 20194965, Free PMC Article
    5. A comparative genomic analysis of two distant diptera, the fruit fly, Drosophila melanogaster, and the malaria mosquito, Anopheles gambiae. Bolshakov VN, et al. Genome Res, 2002 Jan. PMID 11779831, Free PMC Article

    See all (29) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by FlyBase

    Function Evidence Code Pubs
    enables metal ion binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    involved_in negative regulation of epidermal growth factor receptor signaling pathway IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    Component Evidence Code Pubs
    is_active_in early endosome membrane IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  

    General protein information

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    Preferred Names
    uncharacterized protein
    Names
    CG6051-PB
    CG6051-PC
    CG6051-PD
    blade runner 2

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033777.3 Reference assembly

      Range
      27124759..27151069 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001300627.1 → NP_001287556.1  uncharacterized protein Dmel_CG6051, isoform D [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001287556.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A0B4LHZ6
      Conserved Domains (1) summary
      cd15731
      Location:901 → 965
      FYVE_LST2; FYVE domain found in lateral signaling target protein 2 homolog (Lst2) and similar proteins

    2. NM_001260396.1 → NP_001247325.1  uncharacterized protein Dmel_CG6051, isoform C [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001247325.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q86P84, Q8T0G9, Q9VB70
      UniProtKB/TrEMBL
      A0A0B4K6M9
      Conserved Domains (1) summary
      cd15731
      Location:902 → 966
      FYVE_LST2; FYVE domain found in lateral signaling target protein 2 homolog (Lst2) and similar proteins

    3. NM_001104473.2 → NP_001097943.1  uncharacterized protein Dmel_CG6051, isoform B [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001097943.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q86P84, Q8T0G9, Q9VB70
      UniProtKB/TrEMBL
      A0A0B4K6M9
      Conserved Domains (1) summary
      cd15731
      Location:902 → 966
      FYVE_LST2; FYVE domain found in lateral signaling target protein 2 homolog (Lst2) and similar proteins
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    A0A0B4K6M9 A0A0B4K6M9
    A0A0B4LHZ6 A0A0B4LHZ6
    Q9VB70.3 Q9VB70

    Gene LinkOut

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