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    1700007E05Rik RIKEN cDNA 1700007E05 gene [ Mus musculus (house mouse) ]

    Gene ID: 114672, updated on 17-Aug-2024

    Summary

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    Official Symbol
    1700007E05Rikprovided by MGI
    Official Full Name
    RIKEN cDNA 1700007E05 geneprovided by MGI
    Primary source
    MGI:MGI:2149745
    See related
    AllianceGenome:MGI:2149745
    Gene type
    pseudo
    RefSeq status
    MODEL
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
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    Genomic context

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    See 1700007E05Rik in Genome Data Viewer
    Location:
    16 B2; 16 21.58 cM
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 16 NC_000082.7 (31195328..31198773, complement)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 16 NC_000082.6 (31376510..31379956, complement)

    Chromosome 16 - NC_000082.7Genomic Context describing neighboring genes Neighboring gene STARR-seq mESC enhancer starr_40613 Neighboring gene expressed sequence AV205837 Neighboring gene predicted gene, 41443 Neighboring gene STARR-seq mESC enhancer starr_40618 Neighboring gene STARR-seq mESC enhancer starr_40619 Neighboring gene STARR-seq mESC enhancer starr_40620 Neighboring gene STARR-positive B cell enhancer mm9_chr16:31429812-31430112 Neighboring gene 3-hydroxybutyrate dehydrogenase, type 1 Neighboring gene predicted gene 15743 Neighboring gene predicted gene, 53947

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Antisense transcription in the mammalian transcriptome. Katayama S, et al. Science, 2005 Sep 2. PMID 16141073
    2. High-efficiency full-length cDNA cloning. Carninci P, et al. Methods Enzymol, 1999. PMID 10349636
    3. RIKEN integrated sequence analysis (RISA) system--384-format sequencing pipeline with 384 multicapillary sequencer. Shibata K, et al. Genome Res, 2000 Nov. PMID 11076861, Free PMC Article
    4. Normalization and subtraction of cap-trapper-selected cDNAs to prepare full-length cDNA libraries for rapid discovery of new genes. Carninci P, et al. Genome Res, 2000 Oct. PMID 11042159, Free PMC Article
    5. Functional annotation of a full-length mouse cDNA collection. Kawai J, et al. Nature, 2001 Feb 8. PMID 11217851

    See all (7) citations in PubMed

    GeneRIFs: Gene References Into Functions

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000082.7 Reference GRCm39 C57BL/6J

      Range
      31195328..31198773 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    RNA

    1. XR_008604648.1 RNA Sequence

    Nucleotide Protein Strain
    Heading Accession and Version

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