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    lncRNA:CR33963 long non-coding RNA:CR33963 [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 3885572, updated on 11-Sep-2024

    Summary

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    Official Symbol
    lncRNA:CR33963provided by FlyBase
    Official Full Name
    long non-coding RNA:CR33963provided by FlyBase
    Primary source
    FLYBASE:FBgn0053963
    Locus tag
    Dmel_CR33963
    See related
    AllianceGenome:FB:FBgn0053963
    Gene type
    ncRNA
    RNA name
    lncRNA
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    BcDNA:GH04518; CR33963; Dmel\CR33963
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    Genomic context

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    See lncRNA:CR33963 in Genome Data Viewer
    Location:
    11B9-11B9; 1-39 cM
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) X NC_004354.4 (12659462..12660632)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) X NC_004354.3 (12553495..12554665)

    Chromosome X - NC_004354.4Genomic Context describing neighboring genes Neighboring gene tomosyn Neighboring gene mir-970 stem loop Neighboring gene Casein kinase Ialpha Neighboring gene Tis11 zinc finger protein Neighboring gene mir-9377 stem loop Neighboring gene Scutellar Macrochaetes Regulatory Gene

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Diverse and pervasive subcellular distributions for both coding and long noncoding RNAs. Wilk R, et al. Genes Dev, 2016 Mar 1. PMID 26944682, Free PMC Article
    2. High-fidelity promoter profiling reveals widespread alternative promoter usage and transposon-driven developmental gene expression. Batut P, et al. Genome Res, 2013 Jan. PMID 22936248, Free PMC Article
    3. Landscape and evolution of tissue-specific alternative polyadenylation across Drosophila species. Sanfilippo P, et al. Genome Biol, 2017 Nov 30. PMID 29191225, Free PMC Article
    4. The many landscapes of recombination in Drosophila melanogaster. Comeron JM, et al. PLoS Genet, 2012. PMID 23071443, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    • lncRNA:CR33963-RA; Dmel\lncRNA:CR33963-RA; CR33963-RA; Dmel\CR33963-RA

    Gene Ontology Provided by FlyBase

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
    		  

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_004354.4 Reference assembly

      Range
      12659462..12660632
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    RNA

    1. NR_002692.1 RNA Sequence

      Status: REVIEWED

    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

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