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    CG5885 uncharacterized protein [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 34314, updated on 9-Dec-2024

    Summary

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    Official Symbol
    CG5885provided by FlyBase
    Official Full Name
    uncharacterized proteinprovided by FlyBase
    Primary source
    FLYBASE:FBgn0025700
    Locus tag
    Dmel_CG5885
    See related
    AllianceGenome:FB:FBgn0025700
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    AI945207; BEST:CK01296; CK01296; Dmel\CG5885
    Summary
    Predicted to be involved in SRP-dependent cotranslational protein targeting to membrane. Located in cytoplasm. Is expressed in several structures, including adult head; embryonic/larval midgut primordium; gut section; mesoderm; and visceral mesoderm derivative. Orthologous to human SSR3 (signal sequence receptor subunit 3). [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    all
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    Genomic context

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    See CG5885 in Genome Data Viewer
    Location:
    30E4-30E4; 2-37 cM
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 2L NT_033779.5 (9917221..9918330, complement)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 2L NT_033779.4 (9917221..9918176, complement)

    Chromosome 2L - NT_033779.5Genomic Context describing neighboring genes Neighboring gene Splicing regulatory protein 54 Neighboring gene yippee interacting protein 2 Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by FlyBase

    Process Evidence Code Pubs
    involved_in SRP-dependent cotranslational protein targeting to membrane IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in cytoplasm HDA PubMed 
    is_active_in endoplasmic reticulum IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    uncharacterized protein
    Names
    CG5885-PA
    CG5885-PB

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033779.5 Reference assembly

      Range
      9917221..9918330 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001316388.1 → NP_001303317.1  uncharacterized protein Dmel_CG5885, isoform B [Drosophila melanogaster]

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9VL69
      Conserved Domains (1) summary
      pfam07074
      Location:17 → 186
      TRAP-gamma; Translocon-associated protein, gamma subunit (TRAP-gamma)

    2. NM_135477.3 → NP_609321.1  uncharacterized protein Dmel_CG5885, isoform A [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_609321.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9VL69
      Related
      FBpp0079495
      Conserved Domains (1) summary
      pfam07074
      Location:17 → 186
      TRAP-gamma; Translocon-associated protein, gamma subunit (TRAP-gamma)
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9VL69 Q9VL69

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