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    CG10171 uncharacterized protein [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 39501, updated on 9-Dec-2024

    Summary

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    Official Symbol
    CG10171provided by FlyBase
    Official Full Name
    uncharacterized proteinprovided by FlyBase
    Primary source
    FLYBASE:FBgn0036353
    Locus tag
    Dmel_CG10171
    See related
    AllianceGenome:FB:FBgn0036353
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    Dmel\CG10171
    Summary
    Predicted to be active in membrane. Is expressed in several structures, including adult head; embryonic epipharynx; embryonic hypopharynx; embryonic large intestine; and gut section. Orthologous to human TMEM19 (transmembrane protein 19). [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    all
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    Genomic context

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    See CG10171 in Genome Data Viewer
    Location:
    70A7-70A8; 3-40 cM
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 3L NT_037436.4 (13385946..13387907, complement)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3L NT_037436.3 (13379046..13381007, complement)

    Chromosome 3L - NT_037436.4Genomic Context describing neighboring genes Neighboring gene Ecdysone-inducible gene L1 Neighboring gene uncharacterized protein Neighboring gene Proteome of centrioles 1 Neighboring gene senseless

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Defective minor spliceosomes induce SMA-associated phenotypes through sensitive intron-containing neural genes in Drosophila. Li L, et al. Nat Commun, 2020 Nov 5. PMID 33154379, Free PMC Article
    2. A genetic interaction map of cell cycle regulators. Billmann M, et al. Mol Biol Cell, 2016 Apr 15. PMID 26912791, Free PMC Article
    3. Drosophila muller f elements maintain a distinct set of genomic properties over 40 million years of evolution. Leung W, et al. G3 (Bethesda), 2015 Mar 4. PMID 25740935, Free PMC Article
    4. Identification of GOLPH3 Partners in Drosophila Unveils Potential Novel Roles in Tumorigenesis and Neural Disorders. Sechi S, et al. Cells, 2021 Sep 6. PMID 34571985, Free PMC Article
    5. Next-generation large-scale binary protein interaction network for Drosophila melanogaster. Tang HW, et al. Nat Commun, 2023 Apr 15. PMID 37061542, Free PMC Article

    See all (23) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by FlyBase

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    is_active_in membrane IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    uncharacterized protein
    Names
    CG10171-PA
    CG10171-PB

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_037436.4 Reference assembly

      Range
      13385946..13387907 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_168542.3 → NP_729888.1  uncharacterized protein Dmel_CG10171, isoform B [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_729888.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q6AWL9, Q8IQJ7
      Related
      FBpp0075599
      Conserved Domains (1) summary
      pfam01940
      Location:59 → 318
      DUF92; Integral membrane protein DUF92

    2. NM_140382.3 → NP_648639.1  uncharacterized protein Dmel_CG10171, isoform A [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_648639.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q6AWL9, Q9VU64
      Related
      FBpp0075598
      Conserved Domains (1) summary
      pfam01940
      Location:51 → 317
      DUF92; Integral membrane protein DUF92
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q8IQJ7 Q8IQJ7
    Q9VU64 Q9VU64

    Gene LinkOut

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