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    Tex19.2 testis expressed gene 19.2 [ Mus musculus (house mouse) ]

    Gene ID: 70956, updated on 9-Dec-2024

    Summary

    Official Symbol
    Tex19.2provided by MGI
    Official Full Name
    testis expressed gene 19.2provided by MGI
    Primary source
    MGI:MGI:1918206
    See related
    Ensembl:ENSMUSG00000039337 AllianceGenome:MGI:1918206
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    Tex19b; 4921530G04Rik
    Summary
    Enables piRNA binding activity. Involved in male meiotic nuclear division and spermatogenesis. Located in nucleus. Is expressed in several structures, including embryo ectoderm; hindgut; ovary; and testis. Orthologous to human TEX19 (testis expressed 19). [provided by Alliance of Genome Resources, Dec 2024]
    Expression
    Restricted expression toward testis adult (RPKM 11.1) See more
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    Genomic context

    See Tex19.2 in Genome Data Viewer
    Location:
    11 E2; 11 84.96 cM
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 11 NC_000077.7 (121007041..121009503, complement)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 11 NC_000077.6 (121116215..121118677, complement)

    Chromosome 11 - NC_000077.7Genomic Context describing neighboring genes Neighboring gene secreted and transmembrane 1A Neighboring gene predicted gene 11793 Neighboring gene STARR-seq mESC enhancer starr_31377 Neighboring gene testis expressed gene 19.1 Neighboring gene urotensin 2 receptor

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)
    • Endonuclease-mediated (1) 
    • Targeted (3)  1 citation

    General gene information

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables piRNA binding PubMed 
    enables protein binding PubMed 
    Process Evidence Code Pubs
    involved_in cell differentiation  
    involved_in male gonad development  
    involved_in male meiotic nuclear division PubMed 
    involved_in placenta development  
    involved_in spermatogenesis  
    involved_in spermatogenesis PubMed 
    involved_in transposable element silencing  
    Component Evidence Code Pubs
    is_active_in cytoplasm  
    located_in cytoplasm  
    is_active_in nucleus  
    located_in nucleus PubMed 

    General protein information

    Preferred Names
    testis-expressed protein 19.2
    Names
    testis-expressed protein 19B
    testis-expressed sequence 19B

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_027622.3NP_081898.1  testis-expressed protein 19.2

      See identical proteins and their annotated locations for NP_081898.1

      Status: VALIDATED

      Source sequence(s)
      AL662887
      Consensus CDS
      CCDS25767.1
      UniProtKB/Swiss-Prot
      Q9D5S1
      UniProtKB/TrEMBL
      B2RUP5
      Related
      ENSMUSP00000037027.4, ENSMUST00000039146.4
      Conserved Domains (1) summary
      pfam15553
      Location:1145
      TEX19; Testis-expressed protein 19

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000077.7 Reference GRCm39 C57BL/6J

      Range
      121007041..121009503 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
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