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    ybaM DUF2496 domain-containing protein YbaM [ Escherichia coli str. K-12 substr. MG1655 ]

    Gene ID: 945144, updated on 3-Dec-2024

    Summary

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    Official Symbol
    ybaM
    Official Full Name
    DUF2496 domain-containing protein YbaM
    Primary source
    ECOCYC:EG12830
    Locus tag
    b0466
    See related
    ASAP:ABE-0001616
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
    Also known as
    ECK0460
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    Genomic context

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    Sequence:
    NC_000913.3 (490110..490271, complement)

    NC_000913.3Genomic Context describing neighboring genes Neighboring gene DNA-binding transcriptional repressor AcrR Neighboring gene potassium dependent, small conductance mechanosensitive channel Neighboring gene primosomal replication protein N'' Neighboring gene DUF454 domain-containing inner membrane protein YbaN

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_000913.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. The priB and priC replication proteins of Escherichia coli. Genes, DNA sequence, overexpression, and purification. Zavitz KH, et al. J Biol Chem, 1991 Jul 25. PMID 1856227
    2. Global approaches for finding small RNA and small open reading frame functions. Wassarman KM, et al. J Bacteriol, 2010 Jan. PMID 19854892, Free PMC Article
    3. Detection of new genes in a bacterial genome using Markov models for three gene classes. Borodovsky M, et al. Nucleic Acids Res, 1995 Sep 11. PMID 7567469, Free PMC Article
    4. Small RNAs and small proteins involved in resistance to cell envelope stress and acid shock in Escherichia coli: analysis of a bar-coded mutant collection. Hobbs EC, et al. J Bacteriol, 2010 Jan. PMID 19734312, Free PMC Article
    5. The binary protein-protein interaction landscape of Escherichia coli. Rajagopala SV, et al. Nat Biotechnol, 2014 Mar. PMID 24561554, Free PMC Article

    See all (8) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by EcoCyc

    Process Evidence Code Pubs
    acts_upstream_of_or_within cellular response to cell envelope stress IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    DUF2496 domain-containing protein YbaM

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_000913.3 Reference assembly

      Range
      490110..490271 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_414999.1 DUF2496 domain-containing protein YbaM [Escherichia coli str. K-12 substr. MG1655]

      See identical proteins and their annotated locations for NP_414999.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      W1XH60
      Conserved Domains (1) summary
      PRK11038
      Location:1 → 47
      PRK11038; hypothetical protein; Provisional
    Nucleotide Protein
    Heading Accession and Version

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