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    grlA positive regulator GrlA [ Escherichia coli O157:H7 str. Sakai ]

    Gene ID: 915459, updated on 10-Oct-2024

    Summary

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    Gene symbol
    grlA
    Gene description
    positive regulator GrlA
    Locus tag
    ECs_4577
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Escherichia coli O157:H7 str. Sakai (strain: Sakai, substrain: RIMD 0509952, serovar: O157:H7)
    Lineage
    Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
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    Genomic context

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    Sequence:
    NC_002695.2 (4613892..4614305, complement)

    NC_002695.2Genomic Context describing neighboring genes Neighboring gene T3SS secretion switching protein SepD Neighboring gene T3SS structure protein EscC Neighboring gene T3SS chaperone CesD Neighboring gene negative regulator GrlR Neighboring gene hypothetical protein Neighboring gene T3SS structure protein EscU

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_002695.2

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. RNA-binding protein Hfq downregulates locus of enterocyte effacement-encoded regulators independent of small regulatory RNA in enterohemorrhagic Escherichia coli. Sudo N, et al. Mol Microbiol, 2022 Jan. PMID 34411346
    2. Comparative analysis of the whole set of rRNA operons between an enterohemorrhagic Escherichia coli O157:H7 Sakai strain and an Escherichia coli K-12 strain MG1655. Ohnishi M, et al. Syst Appl Microbiol, 2000 Oct. PMID 11108008
    3. Complete nucleotide sequence of the prophage VT2-Sakai carrying the verotoxin 2 genes of the enterohemorrhagic Escherichia coli O157:H7 derived from the Sakai outbreak. Makino K, et al. Genes Genet Syst, 1999 Oct. PMID 10734605
    4. Complete nucleotide sequence of the prophage VT1-Sakai carrying the Shiga toxin 1 genes of the enterohemorrhagic Escherichia coli O157:H7 strain derived from the Sakai outbreak. Yokoyama K, et al. Gene, 2000 Nov 27. PMID 11111050
    5. Complete genome sequence of enterohemorrhagic Escherichia coli O157:H7 and genomic comparison with a laboratory strain K-12. Hayashi T, et al. DNA Res, 2001 Feb 28. PMID 11258796

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. RNA-binding protein Hfq downregulates locus of enterocyte effacement-encoded regulators independent of small regulatory RNA in enterohemorrhagic Escherichia coli.
      Title: RNA-binding protein Hfq downregulates locus of enterocyte effacement-encoded regulators independent of small regulatory RNA in enterohemorrhagic Escherichia coli.
    Submit: New GeneRIF Correction

    General protein information

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    Preferred Names
    positive regulator GrlA

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_002695.2 Reference assembly

      Range
      4613892..4614305 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_312604.1 positive regulator GrlA [Escherichia coli O157:H7 str. Sakai]

      See identical proteins and their annotated locations for NP_312604.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A2X3JR57
      Conserved Domains (1) summary
      pfam07180
      Location:3 → 136
      CaiF_GrlA; CaiF/GrlA transcriptional regulator
    Nucleotide Protein
    Heading Accession and Version

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