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    yhjG AsmA family protein YhjG [ Escherichia coli str. K-12 substr. MG1655 ]

    Gene ID: 948043, updated on 3-Dec-2024

    Summary

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    Official Symbol
    yhjG
    Official Full Name
    AsmA family protein YhjG
    Primary source
    ECOCYC:EG12251
    Locus tag
    b3524
    See related
    ASAP:ABE-0011512
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
    Also known as
    ECK3509; yhjF
    Summary
    Sequence similarity suggests that YhjG may contain -barrel structure(s) . [More information is available at EcoCyc: EG12251].
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    Genomic context

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    Sequence:
    NC_000913.3 (3676290..3678350, complement)

    NC_000913.3Genomic Context describing neighboring genes Neighboring gene putative transporter YhjD Neighboring gene putative transporter YhjE Neighboring gene c-di-GMP phosphodiesterase PdeH Neighboring gene 2-dehydro-3-deoxygluconokinase

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_000913.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A comprehensive library of fluorescent transcriptional reporters for Escherichia coli. Zaslaver A, et al. Nat Methods, 2006 Aug. PMID 16862137
    2. The beta-barrel finder (BBF) program, allowing identification of outer membrane beta-barrel proteins encoded within prokaryotic genomes. Zhai Y, et al. Protein Sci, 2002 Sep. PMID 12192075, Free PMC Article
    3. Membranome: a database for proteome-wide analysis of single-pass membrane proteins. Lomize AL, et al. Nucleic Acids Res, 2017 Jan 4. PMID 27510400, Free PMC Article
    4. Analysis of the Escherichia coli genome. V. DNA sequence of the region from 76.0 to 81.5 minutes. Sofia HJ, et al. Nucleic Acids Res, 1994 Jul 11. PMID 8041620, Free PMC Article
    5. Localization, annotation, and comparison of the Escherichia coli K-12 proteome under two states of growth. Lopez-Campistrous A, et al. Mol Cell Proteomics, 2005 Aug. PMID 15911532

    See all (9) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by EcoCyc

    Process Evidence Code Pubs
    involved_in regulation of protein targeting to membrane IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    Component Evidence Code Pubs
    is_active_in plasma membrane IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    located_in plasma membrane IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		  
    located_in plasma membrane RCA
    inferred from Reviewed Computational Analysis
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    AsmA family protein YhjG

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_000913.3 Reference assembly

      Range
      3676290..3678350 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_417981.2 AsmA family protein YhjG [Escherichia coli str. K-12 substr. MG1655]

      See identical proteins and their annotated locations for NP_417981.2

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A377AAG4
      Conserved Domains (1) summary
      COG2982
      Location:1 → 644
      AsmA; Uncharacterized protein involved in outer membrane biogenesis [Cell wall/membrane/envelope biogenesis]
    Nucleotide Protein
    Heading Accession and Version

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