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    yfjZ putative antitoxin of the YpjF-YfjZ toxin-antitoxin system [ Escherichia coli str. K-12 substr. MG1655 ]

    Gene ID: 947123, updated on 3-Dec-2024

    Summary

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    Official Symbol
    yfjZ
    Official Full Name
    putative antitoxin of the YpjF-YfjZ toxin-antitoxin system
    Primary source
    ECOCYC:G7380
    Locus tag
    b2645
    See related
    ASAP:ABE-0008709
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
    Also known as
    ECK2642
    Summary
    YfjZ mutant slightly NO sensitive. [More information is available at EcoGene: EG13212]. YfjZ is encoded upstream of the toxin YpjF and may function as its antitoxin. [More information is available at EcoCyc: G7380].
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    Genomic context

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    Sequence:
    NC_000913.3 (2777115..2777432)

    NC_000913.3Genomic Context describing neighboring genes Neighboring gene RadC-like JAB domain-containing protein YfjY Neighboring gene DUF987 domain-containing protein YpjJ Neighboring gene toxin of the YpjF-YfjZ toxin-antitoxin system Neighboring gene pseudo

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_000913.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. New genes implicated in the protection of anaerobically grown Escherichia coli against nitric oxide. Justino MC, et al. J Biol Chem, 2005 Jan 28. PMID 15546870
    2. Prophages and bacterial genomics: what have we learned so far? Casjens S. Mol Microbiol, 2003 Jul. PMID 12886937
    3. A novel family of Escherichia coli toxin-antitoxin gene pairs. Brown JM, et al. J Bacteriol, 2003 Nov. PMID 14594833, Free PMC Article
    4. Large-scale identification of protein-protein interaction of Escherichia coli K-12. Arifuzzaman M, et al. Genome Res, 2006 May. PMID 16606699, Free PMC Article
    5. Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110. Hayashi K, et al. Mol Syst Biol, 2006. PMID 16738553, Free PMC Article

    See all (7) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by EcoCyc

    Process Evidence Code Pubs
    involved_in positive regulation of cytoskeleton organization IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    putative antitoxin of the YpjF-YfjZ toxin-antitoxin system

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_000913.3 Reference assembly

      Range
      2777115..2777432
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_417132.1 putative antitoxin of the YpjF-YfjZ toxin-antitoxin system [Escherichia coli str. K-12 substr. MG1655]

      See identical proteins and their annotated locations for NP_417132.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A377C5V3
      Conserved Domains (1) summary
      pfam06154
      Location:5 → 104
      CbeA_antitoxin; type IV, cytoskeleton bundling-enhancing factor A
    Nucleotide Protein
    Heading Accession and Version

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