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    yjjI DUF3029 domain-containing protein YjjI [ Escherichia coli str. K-12 substr. MG1655 ]

    Gene ID: 948904, updated on 3-Dec-2024

    Summary

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    Official Symbol
    yjjI
    Official Full Name
    DUF3029 domain-containing protein YjjI
    Primary source
    ECOCYC:EG12171
    Locus tag
    b4380
    See related
    ASAP:ABE-0014361
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
    Also known as
    ECK4372; yjjH
    Summary
    YjjI and ortholog H. influenzae HI0521 have been reported to be PflB homologs (Kolker, 2004). [More information is available at EcoGene: EG12171].
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    Genomic context

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    Sequence:
    NC_000913.3 (4615515..4617065, complement)

    NC_000913.3Genomic Context describing neighboring genes Neighboring gene DUF1328 domain-containing protein YtjA Neighboring gene putative patatin-like phospholipase YjjU Neighboring gene putative metal-dependent hydrolase YjjV Neighboring gene putative glycyl-radical enzyme activating enzyme YjjW Neighboring gene deoxyribose-phosphate aldolase Neighboring gene thymidine phosphorylase

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_000913.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Integrating high-throughput and computational data elucidates bacterial networks. Covert MW, et al. Nature, 2004 May 6. PMID 15129285
    2. DNA-protein recognition: demonstration of three genetically separated operator elements that are required for repression of the Escherichia coli deoCABD promoters by the DeoR repressor. Valentin-Hansen P, et al. EMBO J, 1986 Aug. PMID 3019678, Free PMC Article
    3. Genome-wide expression analysis indicates that FNR of Escherichia coli K-12 regulates a large number of genes of unknown function. Kang Y, et al. J Bacteriol, 2005 Feb. PMID 15659690, Free PMC Article
    4. Identification and functional analysis of 'hypothetical' genes expressed in Haemophilus influenzae. Kolker E, et al. Nucleic Acids Res, 2004. PMID 15121896, Free PMC Article
    5. Analysis of the Escherichia coli genome VI: DNA sequence of the region from 92.8 through 100 minutes. Burland V, et al. Nucleic Acids Res, 1995 Jun 25. PMID 7610040, Free PMC Article

    See all (10) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by EcoCyc

    Function Evidence Code Pubs
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    		 PubMed 
    Process Evidence Code Pubs
    acts_upstream_of_or_within anaerobic respiration IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    DUF3029 domain-containing protein YjjI

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_000913.3 Reference assembly

      Range
      4615515..4617065 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_418797.1 DUF3029 domain-containing protein YjjI [Escherichia coli str. K-12 substr. MG1655]

      See identical proteins and their annotated locations for NP_418797.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A376X409, A0A6L7CGV4
      Conserved Domains (1) summary
      PRK10977
      Location:7 → 515
      PRK10977; hypothetical protein; Provisional
    Nucleotide Protein
    Heading Accession and Version

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