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    idnO 5-keto-D-gluconate 5-reductase [ Escherichia coli str. K-12 substr. MG1655 ]

    Gene ID: 947109, updated on 3-Dec-2024

    Summary

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    Official Symbol
    idnO
    Official Full Name
    5-keto-D-gluconate 5-reductase
    Primary source
    ECOCYC:G7892
    Locus tag
    b4266
    See related
    ASAP:ABE-0013971
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
    Also known as
    ECK4259; yjgU
    Summary
    The subunit structure of 5-keto-D-gluconate 5-reductase has not been determined. [More information is available at EcoCyc: G7892].
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    Genomic context

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    Sequence:
    NC_000913.3 (4492587..4493351, complement)

    NC_000913.3Genomic Context describing neighboring genes Neighboring gene DNA-binding transcriptional dual regulator IdnR Neighboring gene L-idonate/5-ketogluconate/gluconate transporter Neighboring gene L-idonate 5-dehydrogenase Neighboring gene D-gluconate kinase, thermosensitive

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_000913.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Identification of the yqhE and yafB genes encoding two 2, 5-diketo-D-gluconate reductases in Escherichia coli. Yum DY, et al. Appl Environ Microbiol, 1999 Aug. PMID 10427017, Free PMC Article
    2. Transcriptional organization and regulation of the L-idonic acid pathway (GntII system) in Escherichia coli. Bausch C, et al. J Bacteriol, 2004 Mar. PMID 14973046, Free PMC Article
    3. Sequence analysis of the GntII (subsidiary) system for gluconate metabolism reveals a novel pathway for L-idonic acid catabolism in Escherichia coli. Bausch C, et al. J Bacteriol, 1998 Jul. PMID 9658018, Free PMC Article
    4. An expanded genome-scale model of Escherichia coli K-12 (iJR904 GSM/GPR). Reed JL, et al. Genome Biol, 2003. PMID 12952533, Free PMC Article
    5. What's for dinner?: Entner-Doudoroff metabolism in Escherichia coli. Peekhaus N, et al. J Bacteriol, 1998 Jul. PMID 9657988, Free PMC Article

    See all (10) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Pathways from PubChem

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    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by EcoCyc

    Function Evidence Code Pubs
    enables gluconate 5-dehydrogenase activity IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    enables gluconate 5-dehydrogenase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables oxidoreductase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables protein homodimerization activity IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in L-idonate catabolic process IEA
    Inferred from Electronic Annotation
    more info
    		  
    acts_upstream_of_or_within L-idonate catabolic process IEP
    Inferred from Expression Pattern
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    5-keto-D-gluconate 5-reductase
    NP_418687.1

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_000913.3 Reference assembly

      Range
      4492587..4493351 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_418687.1 5-keto-D-gluconate 5-reductase [Escherichia coli str. K-12 substr. MG1655]

      See identical proteins and their annotated locations for NP_418687.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A5B9AQC3
      Conserved Domains (1) summary
      PRK08085
      Location:1 → 254
      PRK08085; gluconate 5-dehydrogenase; Provisional
    Nucleotide Protein
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