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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
mRNA and Protein(s)
-
NM_001164089.3 → NP_001157561.1 COP9 signalosome complex subunit 7a isoform 2
See identical proteins and their annotated locations for NP_001157561.1
Status: VALIDATED
- Description
- Transcript Variant: This variant (2) represents use of an alternate 5' UTR, and has a distinct 3' terminal exon and UTR, compared to variant 1. The resulting isoform (2) has a longer and distinct C-terminus, compared to isoform 1. Variants 2, 7-10, and 12 all encode the same isoform (2).
- Source sequence(s)
-
AC164563
- Consensus CDS
-
CCDS51909.1
- UniProtKB/TrEMBL
-
D3Z440
- Related
- ENSMUSP00000108058.3, ENSMUST00000112439.9
- Conserved Domains (2) summary
-
- smart00088
Location:87 → 177
- PINT; motif in proteasome subunits, Int-6, Nip-1 and TRIP-15
- pfam18392
Location:166 → 215
- CSN7a_helixI; COP9 signalosome complex subunit 7a helix I domain
-
NM_001355541.2 → NP_001342470.1 COP9 signalosome complex subunit 7a isoform 1
Status: VALIDATED
- Source sequence(s)
-
AC164563
- Consensus CDS
-
CCDS20539.1
- UniProtKB/Swiss-Prot
- O88546, Q925R8, Q9CPQ4, Q9CWD2, Q9CZ04
- UniProtKB/TrEMBL
-
D3Z440
- Conserved Domains (2) summary
-
- smart00088
Location:87 → 177
- PINT; motif in proteasome subunits, Int-6, Nip-1 and TRIP-15
- pfam18392
Location:166 → 215
- CSN7a_helixI; COP9 signalosome complex subunit 7a helix I domain
-
NM_001355542.2 → NP_001342471.1 COP9 signalosome complex subunit 7a isoform 1
Status: VALIDATED
- Description
- Transcript Variant: This variant (4) represents use of an alternate 5' UTR, compared to variant 1, and encodes isoform 1. Variants 1, 3-6, and 11 all encode the same isoform (1).
- Source sequence(s)
-
AC164563
- Consensus CDS
-
CCDS20539.1
- UniProtKB/Swiss-Prot
- O88546, Q925R8, Q9CPQ4, Q9CWD2, Q9CZ04
- UniProtKB/TrEMBL
-
D3Z440
- Conserved Domains (2) summary
-
- smart00088
Location:87 → 177
- PINT; motif in proteasome subunits, Int-6, Nip-1 and TRIP-15
- pfam18392
Location:166 → 215
- CSN7a_helixI; COP9 signalosome complex subunit 7a helix I domain
-
NM_001379119.1 → NP_001366048.1 COP9 signalosome complex subunit 7a isoform 1
Status: VALIDATED
- Source sequence(s)
-
AC164563
- UniProtKB/Swiss-Prot
- O88546, Q925R8, Q9CPQ4, Q9CWD2, Q9CZ04
- UniProtKB/TrEMBL
-
D3Z440
- Conserved Domains (2) summary
-
- smart00088
Location:87 → 177
- PINT; motif in proteasome subunits, Int-6, Nip-1 and TRIP-15
- pfam18392
Location:166 → 215
- CSN7a_helixI; COP9 signalosome complex subunit 7a helix I domain
-
NM_001379120.1 → NP_001366049.1 COP9 signalosome complex subunit 7a isoform 1
Status: VALIDATED
- Source sequence(s)
-
AC164563
- UniProtKB/Swiss-Prot
- O88546, Q925R8, Q9CPQ4, Q9CWD2, Q9CZ04
- UniProtKB/TrEMBL
-
D3Z440
- Conserved Domains (2) summary
-
- smart00088
Location:87 → 177
- PINT; motif in proteasome subunits, Int-6, Nip-1 and TRIP-15
- pfam18392
Location:166 → 215
- CSN7a_helixI; COP9 signalosome complex subunit 7a helix I domain
-
NM_001379122.1 → NP_001366051.1 COP9 signalosome complex subunit 7a isoform 2
Status: VALIDATED
- Source sequence(s)
-
AC164563
- UniProtKB/TrEMBL
-
D3Z440
- Conserved Domains (2) summary
-
- smart00088
Location:87 → 177
- PINT; motif in proteasome subunits, Int-6, Nip-1 and TRIP-15
- pfam18392
Location:166 → 215
- CSN7a_helixI; COP9 signalosome complex subunit 7a helix I domain
-
NM_001379123.1 → NP_001366052.1 COP9 signalosome complex subunit 7a isoform 2
Status: VALIDATED
- Source sequence(s)
-
AC164563
- UniProtKB/TrEMBL
-
D3Z440
- Conserved Domains (2) summary
-
- smart00088
Location:87 → 177
- PINT; motif in proteasome subunits, Int-6, Nip-1 and TRIP-15
- pfam18392
Location:166 → 215
- CSN7a_helixI; COP9 signalosome complex subunit 7a helix I domain
-
NM_001379124.1 → NP_001366053.1 COP9 signalosome complex subunit 7a isoform 2
Status: VALIDATED
- Source sequence(s)
-
AC164563
- UniProtKB/TrEMBL
-
D3Z440
- Conserved Domains (2) summary
-
- smart00088
Location:87 → 177
- PINT; motif in proteasome subunits, Int-6, Nip-1 and TRIP-15
- pfam18392
Location:166 → 215
- CSN7a_helixI; COP9 signalosome complex subunit 7a helix I domain
-
NM_001379125.1 → NP_001366054.1 COP9 signalosome complex subunit 7a isoform 2
Status: VALIDATED
- Source sequence(s)
-
AC164563
- UniProtKB/TrEMBL
-
D3Z440
- Related
- ENSMUSP00000117584.2, ENSMUST00000129976.8
- Conserved Domains (2) summary
-
- smart00088
Location:87 → 177
- PINT; motif in proteasome subunits, Int-6, Nip-1 and TRIP-15
- pfam18392
Location:166 → 215
- CSN7a_helixI; COP9 signalosome complex subunit 7a helix I domain
-
NM_001410594.1 → NP_001397523.1 COP9 signalosome complex subunit 7a isoform 1
Status: VALIDATED
- Source sequence(s)
-
AC164563
- UniProtKB/Swiss-Prot
- O88546, Q925R8, Q9CPQ4, Q9CWD2, Q9CZ04
- UniProtKB/TrEMBL
-
D3Z440
-
NM_001410595.1 → NP_001397524.1 COP9 signalosome complex subunit 7a isoform 2
Status: VALIDATED
- Source sequence(s)
-
AC164563
- UniProtKB/TrEMBL
-
D3Z440
-
NM_012003.4 → NP_036133.1 COP9 signalosome complex subunit 7a isoform 1
See identical proteins and their annotated locations for NP_036133.1
Status: VALIDATED
- Description
- Transcript Variant: This variant (1) encodes the shorter isoform (1). Variants 1, 3-6, and 11 all encode the same isoform (1).
- Source sequence(s)
-
AC164563
- Consensus CDS
-
CCDS20539.1
- UniProtKB/Swiss-Prot
- O88546, Q925R8, Q9CPQ4, Q9CWD2, Q9CZ04
- UniProtKB/TrEMBL
-
D3Z440
- Related
- ENSMUSP00000032220.9, ENSMUST00000032220.15
- Conserved Domains (2) summary
-
- smart00088
Location:87 → 177
- PINT; motif in proteasome subunits, Int-6, Nip-1 and TRIP-15
- pfam18392
Location:166 → 215
- CSN7a_helixI; COP9 signalosome complex subunit 7a helix I domain
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCm39 C57BL/6J
Genomic
-
NC_000072.7 Reference GRCm39 C57BL/6J
- Range
-
124935413..124974866 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_030255406.2 → XP_030111266.1 COP9 signalosome complex subunit 7a isoform X2
- UniProtKB/Swiss-Prot
- O88546, Q925R8, Q9CPQ4, Q9CWD2, Q9CZ04
- UniProtKB/TrEMBL
-
D3Z440
- Conserved Domains (2) summary
-
- smart00088
Location:87 → 177
- PINT; motif in proteasome subunits, Int-6, Nip-1 and TRIP-15
- pfam18392
Location:166 → 215
- CSN7a_helixI; COP9 signalosome complex subunit 7a helix I domain