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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
mRNA and Protein(s)
-
NM_001031692.3 → NP_001026862.1 leucine-rich repeat-containing protein 17 isoform 1 precursor
See identical proteins and their annotated locations for NP_001026862.1
Status: VALIDATED
- Description
- Transcript Variant: This variant (1) encodes the longer isoform (1).
- Source sequence(s)
-
AC073127, AI961444, BC027903, DA749917
- Consensus CDS
-
CCDS34721.1
- UniProtKB/Swiss-Prot
- Q13288, Q6UWA7, Q75MG5, Q8N6Y2
- UniProtKB/TrEMBL
-
A8K2P0
- Related
- ENSP00000344242.4, ENST00000339431.9
- Conserved Domains (4) summary
-
- cd00116
Location:267 → 351
- LRR_RI; Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond ...
- sd00033
Location:63 → 81
- LRR_RI; leucine-rich repeat [structural motif]
- pfam12799
Location:294 → 332
- LRR_4; Leucine Rich repeats (2 copies)
- pfam13855
Location:272 → 328
- LRR_8; Leucine rich repeat
-
NM_005824.3 → NP_005815.2 leucine-rich repeat-containing protein 17 isoform 2 precursor
See identical proteins and their annotated locations for NP_005815.2
Status: VALIDATED
- Description
- Transcript Variant: This variant (2) contains an alternate exon in the 3' UTR and coding region, compared to variant 1, that causes a frameshift. The resulting isoform (2) is shorter and has a distinct C-terminus, compared to isoform 1.
- Source sequence(s)
-
AC073127, AI961444, DA749917, U32907
- Consensus CDS
-
CCDS5727.1
- UniProtKB/Swiss-Prot
-
Q8N6Y2
- Related
- ENSP00000249377.4, ENST00000249377.4
- Conserved Domains (4) summary
-
- sd00031
Location:63 → 83
- LRR_1; leucine-rich repeat [structural motif]
- sd00033
Location:217 → 246
- LRR_RI; leucine-rich repeat [structural motif]
- pfam12799
Location:105 → 146
- LRR_4; Leucine Rich repeats (2 copies)
- pfam13855
Location:84 → 141
- LRR_8; Leucine rich repeat
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCh38.p14 Primary Assembly
Genomic
-
NC_000007.14 Reference GRCh38.p14 Primary Assembly
- Range
-
102913000..102945111
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_047419717.1 → XP_047275673.1 leucine-rich repeat-containing protein 17 isoform X1
- UniProtKB/Swiss-Prot
- Q13288, Q6UWA7, Q75MG5, Q8N6Y2
- UniProtKB/TrEMBL
-
A8K2P0
-
XM_005250108.2 → XP_005250165.1 leucine-rich repeat-containing protein 17 isoform X1
See identical proteins and their annotated locations for XP_005250165.1
- UniProtKB/Swiss-Prot
- Q13288, Q6UWA7, Q75MG5, Q8N6Y2
- UniProtKB/TrEMBL
-
A8K2P0
- Conserved Domains (4) summary
-
- cd00116
Location:267 → 351
- LRR_RI; Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond ...
- sd00033
Location:63 → 81
- LRR_RI; leucine-rich repeat [structural motif]
- pfam12799
Location:294 → 332
- LRR_4; Leucine Rich repeats (2 copies)
- pfam13855
Location:272 → 328
- LRR_8; Leucine rich repeat
Alternate T2T-CHM13v2.0
Genomic
-
NC_060931.1 Alternate T2T-CHM13v2.0
- Range
-
104227406..104260198
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)