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    CCZ1P-OR7E38P CCZ1P-OR7E38P readthrough [ Homo sapiens (human) ]

    Gene ID: 389538, updated on 10-Dec-2024

    Summary

    Gene symbol
    CCZ1P-OR7E38P
    Gene description
    CCZ1P-OR7E38P readthrough
    See related
    Ensembl:ENSG00000285725
    Gene type
    pseudo
    RefSeq status
    VALIDATED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Summary
    This locus represents naturally-occurring readthrough transcription between two unprocessed unitary pseudogenes, CCZ1P (CCZ1 homolog, vacuolar protein trafficking and biogenesis associated pseudogene) and OR7E38P (olfactory receptor family 7 subfamily E member 38 pseudogene). The individual pseudogene loci are not curated as transcribed regions. Readthrough transcripts contains disrupted open reading frames, relative to functional homologs, and likely do not encode functional proteins. [provided by RefSeq, Jun 2017]
    Expression
    Ubiquitous expression in fat (RPKM 6.3), lymph node (RPKM 5.3) and 25 other tissues See more
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    Genomic context

    See CCZ1P-OR7E38P in Genome Data Viewer
    Location:
    7q21.3
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 7 NC_000007.14 (97966408..97972358, complement)
    RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 7 NC_060931.1 (99196501..99202450, complement)
    RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 7 NC_000007.13 (97595720..97601670, complement)

    Chromosome 7 - NC_000007.14Genomic Context describing neighboring genes Neighboring gene CZ1P-ASNS readthrough Neighboring gene microRNA 5692a-1 Neighboring gene microRNA 5692c-2 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 18389 Neighboring gene olfactory receptor family 7 subfamily E member 38 pseudogene Neighboring gene CCZ1 pseudogene 1 Neighboring gene oncomodulin 2 Neighboring gene RNA, 7SL, cytoplasmic 478, pseudogene

    Genomic regions, transcripts, and products

    Expression

    • Project title: HPA RNA-seq normal tissues
    • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
    • BioProject: PRJEB4337
    • Publication: PMID 24309898
    • Analysis date: Wed Apr 4 07:08:55 2018

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    RNA

    1. NR_002822.4 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AC004967, BC062733, BU729834
      Related
      ENST00000750295.1
    2. NR_148008.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AC004967, BQ678047, BU729834
      Related
      ENST00000750818.1

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000007.14 Reference GRCh38.p14 Primary Assembly

      Range
      97966408..97972358 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060931.1 Alternate T2T-CHM13v2.0

      Range
      99196501..99202450 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)