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    RPL7AP50 ribosomal protein L7a pseudogene 50 [ Homo sapiens (human) ]

    Gene ID: 87688, updated on 17-Sep-2024

    Summary

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    Official Symbol
    RPL7AP50provided by HGNC
    Official Full Name
    ribosomal protein L7a pseudogene 50provided by HGNC
    Primary source
    HGNC:HGNC:36117
    See related
    Ensembl:ENSG00000213609 AllianceGenome:HGNC:36117
    Gene type
    pseudo
    RefSeq status
    INFERRED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Also known as
    RPL7A_23_1048
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    Genomic context

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    See RPL7AP50 in Genome Data Viewer
    Location:
    10q21.3
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 10 NC_000010.11 (63902384..63903265, complement)
    RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 10 NC_060934.1 (64760146..64761027, complement)
    RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 10 NC_000010.10 (65662144..65663025, complement)

    Chromosome 10 - NC_000010.11Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC107984238 Neighboring gene uncharacterized LOC124902438 Neighboring gene Sharpr-MPRA regulatory region 9763 Neighboring gene H3K4me1 hESC enhancers GRCh37_chr10:65444405-65444906 and GRCh37_chr10:65444907-65445406 Neighboring gene P300/CBP strongly-dependent group 1 enhancer GRCh37_chr10:65466673-65467872 Neighboring gene OCT4-NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr10:65473036-65473714 Neighboring gene MPRA-validated peak967 silencer Neighboring gene uncharacterized LOC101928859 Neighboring gene uncharacterized LOC124902439 Neighboring gene nuclear pore associated protein 1 pseudogene Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 2412 Neighboring gene uncharacterized LOC105378333

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Human L7a ribosomal protein: sequence, structural organization, and expression of a functional gene. De Falco S, et al. Gene, 1993 Apr 30. PMID 8482538
    2. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. Balasubramanian S, et al. Genome Biol, 2009. PMID 19123937, Free PMC Article

    GeneRIFs: Gene References Into Functions

    Phenotypes

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    Review eQTL and phenotype association data in this region using PheGenI

    Variation

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    See studies and variants in dbVar

    See Variation Viewer (GRCh37.p13)

    See Variation Viewer (GRCh38)

    General gene information

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    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    Genomic

    1. NG_003062.4 

      Range
      101..982
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000010.11 Reference GRCh38.p14 Primary Assembly

      Range
      63902384..63903265 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060934.1 Alternate T2T-CHM13v2.0

      Range
      64760146..64761027 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein
    Heading Accession and Version

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