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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
Genomic
-
NG_052811.1 RefSeqGene
- Range
-
5035..29251
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
NM_000723.5 → NP_000714.3 voltage-dependent L-type calcium channel subunit beta-1 isoform 1
See identical proteins and their annotated locations for NP_000714.3
Status: REVIEWED
- Description
- Transcript Variant: This variant (1), also known as beta-1b2, betaA, and beta-1B, encodes the longest isoform (1).
- Source sequence(s)
-
AC004408, AK289729, BC037311
- Consensus CDS
-
CCDS42311.1
- UniProtKB/Swiss-Prot
- A8K114, O15331, Q02639, Q02640, Q02641, Q8N3X9, Q9C085, Q9UD79
- UniProtKB/TrEMBL
-
Q59GD3
- Related
- ENSP00000377840.3, ENST00000394303.8
- Conserved Domains (3) summary
-
- pfam00625
Location:228 → 408
- Guanylate_kin; Guanylate kinase
- pfam12052
Location:58 → 99
- VGCC_beta4Aa_N; Voltage gated calcium channel subunit beta domain 4Aa N terminal
- cl17036
Location:99 → 166
- SH3; Src Homology 3 domain superfamily
-
NM_199247.3 → NP_954855.1 voltage-dependent L-type calcium channel subunit beta-1 isoform 2
See identical proteins and their annotated locations for NP_954855.1
Status: REVIEWED
- Description
- Transcript Variant: This variant (2), also known as beta-1M, betaC, and beta-1a, differs in the 3' UTR and has multiple coding region differences, compared to variant 1. It encodes isoform 2 which has a distinct C-terminus, compared to isoform 1.
- Source sequence(s)
-
BP217857, M76560, M92301, M92302
- Consensus CDS
-
CCDS11334.1
- UniProtKB/TrEMBL
-
B7Z6N7
- Related
- ENSP00000345461.5, ENST00000344140.6
- Conserved Domains (4) summary
-
- cd12041
Location:99 → 166
- SH3_CACNB1; Src Homology 3 domain of Voltage-dependent L-type calcium channel subunit beta-1
- pfam00625
Location:273 → 453
- Guanylate_kin; Guanylate kinase
- pfam12052
Location:58 → 99
- VGCC_beta4Aa_N; Voltage gated calcium channel subunit beta domain 4Aa N terminal
- cl17190
Location:283 → 454
- NK; Nucleoside/nucleotide kinase (NK) is a protein superfamily consisting of multiple families of enzymes that share structural similarity and are functionally related to the catalysis of the reversible phosphate group transfer from nucleoside triphosphates ...
-
NM_199248.3 → NP_954856.1 voltage-dependent L-type calcium channel subunit beta-1 isoform 3
See identical proteins and their annotated locations for NP_954856.1
Status: REVIEWED
- Description
- Transcript Variant: This variant (3), also known as beta-1b1, betaB, and beta-1c, differs in the 3' UTR and 3' coding region, compared to variant 1. It encodes isoform 3 which is shorter and has a distinct C-terminus, compared to isoform 1.
- Source sequence(s)
-
BP217857, M76560, M92302
- Consensus CDS
-
CCDS45665.1
- UniProtKB/TrEMBL
-
B7Z6N7
- Related
- ENSP00000377847.3, ENST00000394310.7
- Conserved Domains (4) summary
-
- cd12041
Location:99 → 166
- SH3_CACNB1; Src Homology 3 domain of Voltage-dependent L-type calcium channel subunit beta-1
- pfam00625
Location:228 → 408
- Guanylate_kin; Guanylate kinase
- pfam12052
Location:58 → 99
- VGCC_beta4Aa_N; Voltage gated calcium channel subunit beta domain 4Aa N terminal
- cl17190
Location:238 → 409
- NK; Nucleoside/nucleotide kinase (NK) is a protein superfamily consisting of multiple families of enzymes that share structural similarity and are functionally related to the catalysis of the reversible phosphate group transfer from nucleoside triphosphates ...
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCh38.p14 Primary Assembly
Genomic
-
NC_000017.11 Reference GRCh38.p14 Primary Assembly
- Range
-
39173453..39197669 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_005257645.3 → XP_005257702.1 voltage-dependent L-type calcium channel subunit beta-1 isoform X1
- UniProtKB/TrEMBL
-
Q59GD3
- Conserved Domains (4) summary
-
- smart00072
Location:283 → 454
- GuKc; Guanylate kinase homologues
- pfam00625
Location:273 → 453
- Guanylate_kin; Guanylate kinase
- pfam12052
Location:58 → 99
- VGCC_beta4Aa_N; Voltage gated calcium channel subunit beta domain 4Aa N terminal
- cl17036
Location:99 → 166
- SH3; Src Homology 3 domain superfamily
-
XM_017025025.2 → XP_016880514.1 voltage-dependent L-type calcium channel subunit beta-1 isoform X3
- UniProtKB/TrEMBL
-
Q59GD3
-
XM_006722072.3 → XP_006722135.1 voltage-dependent L-type calcium channel subunit beta-1 isoform X2
- UniProtKB/TrEMBL
-
Q59GD3
- Conserved Domains (4) summary
-
- smart00072
Location:236 → 407
- GuKc; Guanylate kinase homologues
- pfam00625
Location:226 → 406
- Guanylate_kin; Guanylate kinase
- pfam12052
Location:11 → 52
- VGCC_beta4Aa_N; Voltage gated calcium channel subunit beta domain 4Aa N terminal
- cl17036
Location:52 → 119
- SH3; Src Homology 3 domain superfamily
-
XM_017025024.2 → XP_016880513.1 voltage-dependent L-type calcium channel subunit beta-1 isoform X6
- UniProtKB/TrEMBL
-
Q59GD3
-
XM_047436675.1 → XP_047292631.1 voltage-dependent L-type calcium channel subunit beta-1 isoform X5
- UniProtKB/TrEMBL
-
B3KXG1
-
XM_005257646.4 → XP_005257703.1 voltage-dependent L-type calcium channel subunit beta-1 isoform X4
- UniProtKB/TrEMBL
-
B7Z4Q4
- Conserved Domains (3) summary
-
- pfam12052
Location:58 → 99
- VGCC_beta4Aa_N; Voltage gated calcium channel subunit beta domain 4Aa N terminal
- cl17036
Location:99 → 166
- SH3; Src Homology 3 domain superfamily
- cl17190
Location:283 → 396
- NK; Nucleoside/nucleotide kinase (NK) is a protein superfamily consisting of multiple families of enzymes that share structural similarity and are functionally related to the catalysis of the reversible phosphate group transfer from nucleoside triphosphates ...
Alternate T2T-CHM13v2.0
Genomic
-
NC_060941.1 Alternate T2T-CHM13v2.0
- Range
-
40037330..40061546 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_054317086.1 → XP_054173061.1 voltage-dependent L-type calcium channel subunit beta-1 isoform X1
- UniProtKB/TrEMBL
-
Q59GD3
-
XM_054317087.1 → XP_054173062.1 voltage-dependent L-type calcium channel subunit beta-1 isoform X2
- UniProtKB/TrEMBL
-
Q59GD3
-
XM_054317088.1 → XP_054173063.1 voltage-dependent L-type calcium channel subunit beta-1 isoform X3
- UniProtKB/TrEMBL
-
Q59GD3
-
XM_054317090.1 → XP_054173065.1 voltage-dependent L-type calcium channel subunit beta-1 isoform X5
- UniProtKB/TrEMBL
-
B3KXG1
-
XM_054317089.1 → XP_054173064.1 voltage-dependent L-type calcium channel subunit beta-1 isoform X4
- UniProtKB/TrEMBL
-
B7Z4Q4