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    GAPDHP1 glyceraldehyde-3-phosphate dehydrogenase pseudogene 1 [ Homo sapiens (human) ]

    Gene ID: 2616, updated on 10-Dec-2024

    Summary

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    Official Symbol
    GAPDHP1provided by HGNC
    Official Full Name
    glyceraldehyde-3-phosphate dehydrogenase pseudogene 1provided by HGNC
    Primary source
    HGNC:HGNC:4159
    See related
    AllianceGenome:HGNC:4159
    Gene type
    pseudo
    RefSeq status
    VALIDATED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Also known as
    GAPDL2; GAPDP1; GAPDHL2
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    Genomic context

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    See GAPDHP1 in Genome Data Viewer
    Location:
    Xp11.4
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCh38.p14 (GCF_000001405.40) X NC_000023.11 (39786931..39787828, complement)
    RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) X NC_060947.1 (39187111..39188008, complement)
    RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) X NC_000023.10 (39646185..39647082, complement)

    Chromosome X - NC_000023.11Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC105373178 Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chrX:39631621-39632253 Neighboring gene uncharacterized LOC105373177 Neighboring gene H3K4me1 hESC enhancer GRCh37_chrX:39637201-39637702 Neighboring gene RNA, 7SL, cytoplasmic 732, pseudogene Neighboring gene OOEP pseudogene 1 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 29528 Neighboring gene OCT4-NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chrX:39675935-39676850 Neighboring gene NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chrX:39676851-39677768 Neighboring gene H3K4me1 hESC enhancer GRCh37_chrX:39686865-39687366 Neighboring gene H3K4me1 hESC enhancer GRCh37_chrX:39687367-39687866 Neighboring gene microRNA 1587

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A glyceraldehyde-3-phosphate dehydrogenase pseudogene on the short arm of the human X chromosomes defines a multigene family. Benham FJ, et al. EMBO J, 1984 Nov. PMID 6542494, Free PMC Article
    2. The glyceraldehyde 3 phosphate dehydrogenase gene family: structure of a human cDNA and of an X chromosome linked pseudogene; amazing complexity of the gene family in mouse. Hanauer A, et al. EMBO J, 1984 Nov. PMID 6096136, Free PMC Article
    3. High-throughput analysis of the RNA-induced silencing complex in myotonic dystrophy type 1 patients identifies the dysregulation of miR-29c and its target ASB2. Cappella M, et al. Cell Death Dis, 2018 Jun 28. PMID 29955039, Free PMC Article

    GeneRIFs: Gene References Into Functions

    Phenotypes

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    Review eQTL and phenotype association data in this region using PheGenI

    Variation

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    See studies and variants in dbVar

    See Variation Viewer (GRCh37.p13)

    See Variation Viewer (GRCh38)

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Markers

    Other Names

    • glyceraldehyde-3-phosphate dehydrogenase-like 2

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    Genomic

    1. NG_001123.6 

      Range
      101..998
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000023.11 Reference GRCh38.p14 Primary Assembly

      Range
      39786931..39787828 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060947.1 Alternate T2T-CHM13v2.0

      Range
      39187111..39188008 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

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    Research Materials