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    Tmem101 transmembrane protein 101 [ Mus musculus (house mouse) ]

    Gene ID: 76547, updated on 27-Nov-2024

    Summary

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    Official Symbol
    Tmem101provided by MGI
    Official Full Name
    transmembrane protein 101provided by MGI
    Primary source
    MGI:MGI:1923797
    See related
    Ensembl:ENSMUSG00000020921 AllianceGenome:MGI:1923797
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    2610511E22Rik
    Summary
    Predicted to be located in membrane. Is expressed in genitourinary system. Orthologous to human TMEM101 (transmembrane protein 101). [provided by Alliance of Genome Resources, Nov 2024]
    Expression
    Ubiquitous expression in ovary adult (RPKM 15.2), limb E14.5 (RPKM 12.4) and 28 other tissues See more
    Orthologs
    human all
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    Genomic context

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    See Tmem101 in Genome Data Viewer
    Location:
    11 D; 11 65.52 cM
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 11 NC_000077.7 (102043372..102047245, complement)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 11 NC_000077.6 (102152546..102156422, complement)

    Chromosome 11 - NC_000077.7Genomic Context describing neighboring genes Neighboring gene predicted gene, 39394 Neighboring gene Ppih pseudogene Neighboring gene predicted gene 11586 Neighboring gene N-acetylglutamate synthase Neighboring gene CapStarr-seq enhancer MGSCv37_chr11:102017679-102017862 Neighboring gene LSM12 homolog Neighboring gene STARR-positive B cell enhancer ABC_E10715 Neighboring gene glucose 6 phosphatase, catalytic, 3

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Bibliography

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    Related articles in PubMed

    1. GUDMAP: the genitourinary developmental molecular anatomy project. McMahon AP, et al. J Am Soc Nephrol, 2008 Apr. PMID 18287559
    2. Large-scale gene trapping in C57BL/6N mouse embryonic stem cells. Hansen GM, et al. Genome Res, 2008 Oct. PMID 18799693, Free PMC Article
    3. Normalization and subtraction: two approaches to facilitate gene discovery. Bonaldo MF, et al. Genome Res, 1996 Sep. PMID 8889548
    4. Wnk1 kinase deficiency lowers blood pressure in mice: a gene-trap screen to identify potential targets for therapeutic intervention. Zambrowicz BP, et al. Proc Natl Acad Sci U S A, 2003 Nov 25. PMID 14610273, Free PMC Article
    5. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). Gerhard DS, et al. Genome Res, 2004 Oct. PMID 15489334, Free PMC Article

    See all (13) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Variation

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    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)
    • Gene trapped (1) 

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by MGI

    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
    		  
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    transmembrane protein 101

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_029649.2 → NP_083925.2  transmembrane protein 101

      See identical proteins and their annotated locations for NP_083925.2

      Status: VALIDATED

      Source sequence(s)
      AK041154, AK140260
      Consensus CDS
      CCDS25489.1
      UniProtKB/Swiss-Prot
      Q91VP7, Q9CZW0
      Related
      ENSMUSP00000021296.7, ENSMUST00000021296.7
      Conserved Domains (1) summary
      pfam15111
      Location:8 → 256
      TMEM101; TMEM101 protein family

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000077.7 Reference GRCm39 C57BL/6J

      Range
      102043372..102047245 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_017314829.3 → XP_017170318.1  transmembrane protein 101 isoform X1

      Conserved Domains (1) summary
      pfam15111
      Location:1 → 198
      TMEM101; TMEM101 protein family
    Nucleotide Protein Strain
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q91VP7.1 GenPept UniProtKB/Swiss-Prot:Q91VP7

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

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