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    CG18428 uncharacterized protein [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 42857, updated on 9-Dec-2024

    Summary

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    Official Symbol
    CG18428provided by FlyBase
    Official Full Name
    uncharacterized proteinprovided by FlyBase
    Primary source
    FLYBASE:FBgn0039149
    Locus tag
    Dmel_CG18428
    See related
    AllianceGenome:FB:FBgn0039149
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    Dmel\CG18428
    Summary
    Orthologous to human ARL6IP4 (ADP ribosylation factor like GTPase 6 interacting protein 4). [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    all
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    Genomic context

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    See CG18428 in Genome Data Viewer
    Location:
    95E1-95E1; 3-83 cM
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 3R NT_033777.3 (24109336..24110010)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3R NT_033777.2 (19935089..19935732)

    Chromosome 3R - NT_033777.3Genomic Context describing neighboring genes Neighboring gene eukaryotic translation initiation factor 4E homologous protein Neighboring gene Syntaxin 1A Neighboring gene transfer RNA:Leucine-TAA 2-1 Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene Rootletin

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. NineTeen Complex-subunit Salsa is required for efficient splicing of a subset of introns and dorsal-ventral patterning. Rathore OS, et al. RNA, 2020 Dec. PMID 32963109, Free PMC Article
    2. Modularity and hormone sensitivity of the Drosophila melanogaster insulin receptor/target of rapamycin interaction proteome. Glatter T, et al. Mol Syst Biol, 2011 Nov 8. PMID 22068330, Free PMC Article
    3. Genome-wide measurement of spatial expression in patterning mutants of Drosophila melanogaster. Combs PA, et al. F1000Res, 2017. PMID 28299188, Free PMC Article
    4. A Cross-Species Study of PI3K Protein-Protein Interactions Reveals the Direct Interaction of P85 and SHP2. Breitkopf SB, et al. Sci Rep, 2016 Feb 3. PMID 26839216, Free PMC Article
    5. Ultra-deep sequencing of ribosome-associated poly-adenylated RNA in early Drosophila embryos reveals hundreds of conserved translated sORFs. Li H, et al. DNA Res, 2016 Dec. PMID 27559081, Free PMC Article

    See all (30) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    General protein information

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    Preferred Names
    uncharacterized protein
    Names
    CG18428-PA
    CG18428-PC

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033777.3 Reference assembly

      Range
      24109336..24110010
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001300567.2 → NP_001287496.1  uncharacterized protein Dmel_CG18428, isoform C [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001287496.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q4V5H0
      Conserved Domains (1) summary
      pfam10500
      Location:8 → 70
      SR-25; Nuclear RNA-splicing-associated protein

    2. NM_142956.3 → NP_651213.1  uncharacterized protein Dmel_CG18428, isoform A [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_651213.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      C9QP01, Q9VCD4
      Related
      FBpp0083928
      Conserved Domains (1) summary
      pfam10500
      Location:74 → 136
      SR-25; Nuclear RNA-splicing-associated protein
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q4V5H0 Q4V5H0
    Q9VCD4 Q9VCD4

    Gene LinkOut

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