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    RpS5b Ribosomal protein S5b [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 41807, updated on 9-Dec-2024

    Summary

    Official Symbol
    RpS5bprovided by FlyBase
    Official Full Name
    Ribosomal protein S5bprovided by FlyBase
    Primary source
    FLYBASE:FBgn0038277
    Locus tag
    Dmel_CG7014
    See related
    AllianceGenome:FB:FBgn0038277
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    142157_at; CG7014; Dmel\CG7014; RbS5b; rps5b; RPS5b; RS5B_DROME; S5b
    Summary
    Predicted to enable mRNA binding activity and rRNA binding activity. Predicted to be a structural constituent of ribosome. Predicted to be involved in ribosomal small subunit assembly and translation. Predicted to be part of cytosolic small ribosomal subunit. Predicted to be active in ribosome. Is expressed in adult head and organism. Orthologous to human RPS5 (ribosomal protein S5). [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
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    Genomic context

    See RpS5b in Genome Data Viewer
    Location:
    88D6-88D6; 3-56 cM
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 3R NT_033777.3 (14900432..14901563, complement)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3R NT_033777.2 (10726154..10727285, complement)

    Chromosome 3R - NT_033777.3Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene Nucleoporin 93kD-2 Neighboring gene uncharacterized protein Neighboring gene Vacuolar H[+] ATPase PPA1 subunit 2 Neighboring gene Vacuolar H[+] ATPase PPA1 subunit 1 Neighboring gene long non-coding RNA:CR46199

    Genomic regions, transcripts, and products

    Pathways from PubChem

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Gene Ontology Provided by FlyBase

    Function Evidence Code Pubs
    enables RNA binding IEA
    Inferred from Electronic Annotation
    more info
     
    enables mRNA binding IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables rRNA binding IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables structural constituent of ribosome IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables structural constituent of ribosome IEA
    Inferred from Electronic Annotation
    more info
     
    enables structural constituent of ribosome TAS
    Traceable Author Statement
    more info
    PubMed 
    Process Evidence Code Pubs
    involved_in cytoplasmic translation TAS
    Traceable Author Statement
    more info
    PubMed 
    involved_in ribosomal small subunit assembly IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in translation IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in translation IEA
    Inferred from Electronic Annotation
    more info
     
    Component Evidence Code Pubs
    part_of cytosolic small ribosomal subunit IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    part_of cytosolic small ribosomal subunit TAS
    Traceable Author Statement
    more info
    PubMed 
    is_active_in ribosome IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    part_of small ribosomal subunit IEA
    Inferred from Electronic Annotation
    more info
     

    General protein information

    Preferred Names
    ribosomal protein S5b
    Names
    CG7014-PA
    CG7014-PB
    RpS5b-PA
    RpS5b-PB

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033777.3 Reference assembly

      Range
      14900432..14901563 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_142150.3NP_650407.1  ribosomal protein S5b, isoform A [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_650407.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q9VFE4
      Related
      FBpp0082465
      Conserved Domains (1) summary
      cd14867
      Location:44230
      uS7_Eukaryote; Eukaryota homolog of Ribosomal Protein S7
    2. NM_001260181.2NP_001247110.1  ribosomal protein S5b, isoform B [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001247110.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A0B4K683
      Conserved Domains (1) summary
      cl00313
      Location:44175
      uS7; Ribosomal protein S7