U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    HBS1 HBS1 [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 117365, updated on 9-Dec-2024

    Summary

    Official Symbol
    HBS1provided by FlyBase
    Official Full Name
    HBS1provided by FlyBase
    Primary source
    FLYBASE:FBgn0042712
    Locus tag
    Dmel_CG1898
    See related
    AllianceGenome:FB:FBgn0042712
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    CG1898; Dmel\CG1898; hbs1; Hbs1
    Summary
    Predicted to enable GTPase activity. Involved in post-transcriptional gene silencing; sperm individualization; and spermatocyte division. Located in cytoplasm. Is expressed in several structures, including adult head; anterior endoderm anlage; mesoderm; and posterior endoderm. Human ortholog(s) of this gene implicated in beta thalassemia. Orthologous to human HBS1L (HBS1 like translational GTPase). [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    See HBS1 in Genome Data Viewer
    Location:
    62B7-62B7; 3-1.0 cM
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 3L NT_037436.4 (1862881..1865240, complement)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3L NT_037436.3 (1862881..1865240, complement)

    Chromosome 3L - NT_037436.4Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene Rap1 GTPase Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein

    Genomic regions, transcripts, and products

    Pathways from PubChem

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General protein information

    Preferred Names
    HBS1
    Names
    CG1898-PA
    CG1898-PB
    HBS1-PA
    HBS1-PB

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_037436.4 Reference assembly

      Range
      1862881..1865240 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001299977.1NP_001286906.1  HBS1, isoform B [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001286906.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q86NR4, Q9W074
      Conserved Domains (2) summary
      COG5256
      Location:241669
      TEF1; Translation elongation factor EF-1alpha (GTPase) [Translation, ribosomal structure and biogenesis]
      pfam08938
      Location:90145
      HBS1_N; HBS1 N-terminus
    2. NM_144472.4NP_652729.2  HBS1, isoform A [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_652729.2

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q86NR4, Q9W074
      Related
      FBpp0072745
      Conserved Domains (2) summary
      COG5256
      Location:241669
      TEF1; Translation elongation factor EF-1alpha (GTPase) [Translation, ribosomal structure and biogenesis]
      pfam08938
      Location:90145
      HBS1_N; HBS1 N-terminus