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    RpL39 Ribosomal protein L39 [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 37849, updated on 9-Dec-2024

    Summary

    Official Symbol
    RpL39provided by FlyBase
    Official Full Name
    Ribosomal protein L39provided by FlyBase
    Primary source
    FLYBASE:FBgn0023170
    Locus tag
    Dmel_CG3997
    See related
    AllianceGenome:FB:FBgn0023170
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    anon-EST:Posey16; BcDNA:RH27094; CG3997; Dmel\CG3997; L39; L39e; rp46; Rp46; RpL46; RPl46
    Summary
    Predicted to be a structural constituent of ribosome. Predicted to be involved in cytoplasmic translation. Predicted to be located in ribosome. Predicted to be part of cytosolic large ribosomal subunit. Is expressed in adult fat body and organism. Orthologous to human RPL39 (ribosomal protein L39); RPL39L (ribosomal protein L39 like); and RPL39P5 (ribosomal protein L39 pseudogene 5). [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
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    Genomic context

    See RpL39 in Genome Data Viewer
    Location:
    60B7-60B7; 2-106 cM
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 2R NT_033778.4 (24061853..24062431, complement)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 2R NT_033778.3 (19949376..19949954, complement)

    Chromosome 2R - NT_033778.4Genomic Context describing neighboring genes Neighboring gene pickpocket 29 Neighboring gene uncharacterized protein Neighboring gene long non-coding RNA:CR44814 Neighboring gene eukaryotic translation elongation factor 5 Neighboring gene Ribosomal protein L12 Neighboring gene Ras-associated protein 2-like Neighboring gene yorkie

    Genomic regions, transcripts, and products

    Pathways from PubChem

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Gene Ontology Provided by FlyBase

    Function Evidence Code Pubs
    enables structural constituent of ribosome IEA
    Inferred from Electronic Annotation
    more info
     
    enables structural constituent of ribosome TAS
    Traceable Author Statement
    more info
    PubMed 
    Process Evidence Code Pubs
    involved_in cytoplasmic translation TAS
    Traceable Author Statement
    more info
    PubMed 
    involved_in translation IEA
    Inferred from Electronic Annotation
    more info
     
    Component Evidence Code Pubs
    part_of cytosolic large ribosomal subunit IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    part_of cytosolic large ribosomal subunit TAS
    Traceable Author Statement
    more info
    PubMed 
    located_in ribosome IEA
    Inferred from Electronic Annotation
    more info
     

    General protein information

    Preferred Names
    ribosomal protein L39
    Names
    CG3997-PA
    RpL39-PA
    ribosomal protein L46

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033778.4 Reference assembly

      Range
      24061853..24062431 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_057966.5NP_477314.1  ribosomal protein L39 [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_477314.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      O16130, Q9W1B7
      UniProtKB/TrEMBL
      A0A1B2ALR4
      Related
      FBpp0072094
      Conserved Domains (1) summary
      pfam00832
      Location:2050
      Ribosomal_L39; Ribosomal L39 protein