U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    aspr asperous [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 33013, updated on 9-Dec-2024

    Summary

    Go to the top of the page Help
    Official Symbol
    asprprovided by FlyBase
    Official Full Name
    asperousprovided by FlyBase
    Primary source
    FLYBASE:FBgn0031089
    Locus tag
    Dmel_CG9572
    See related
    AllianceGenome:FB:FBgn0031089
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    CG9572; CT17356; Dmel\CG9572
    Summary
    Involved in positive regulation of Notch signaling pathway and tissue regeneration. Predicted to be located in extracellular space. [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    all
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See aspr in Genome Data Viewer
    Location:
    19B3-19B3; 1-64 cM
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) X NC_004354.4 (20148124..20155514)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) X NC_004354.3 (20042157..20049547)

    Chromosome X - NC_004354.4Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene Odorant receptor 19a Neighboring gene Rab35 Neighboring gene PHD finger protein 7

    Genomic regions, transcripts, and products

    Go to the top of the page Help

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Specific age-related signatures in Drosophila body parts transcriptome. Girardot F, et al. BMC Genomics, 2006 Apr 4. PMID 16584578, Free PMC Article
    2. Using qualitative probability in reverse-engineering gene regulatory networks. Ibrahim ZM, et al. IEEE/ACM Trans Comput Biol Bioinform, 2011 Mar-Apr. PMID 20876933
    3. Ets21C sustains a pro-regenerative transcriptional program in blastema cells of Drosophila imaginal discs. Worley MI, et al. Curr Biol, 2022 Aug 8. PMID 35820420, Free PMC Article
    4. Temporal and sequential order of nonoverlapping gene networks unraveled in mated female Drosophila. Pasquier C, et al. Life Sci Alliance, 2022 Feb. PMID 34844981, Free PMC Article
    5. Damage-responsive, maturity-silenced enhancers regulate multiple genes that direct regeneration in Drosophila. Harris RE, et al. Elife, 2020 Jun 3. PMID 32490812, Free PMC Article

    See all (28) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

    Go to the top of the page Help
    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Go to the top of the page Help

    Homology

    Gene Ontology Provided by FlyBase

    Process Evidence Code Pubs
    involved_in positive regulation of Notch signaling pathway IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    involved_in tissue regeneration IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in extracellular space TAS
    Traceable Author Statement
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    asperous
    Names
    CG9572-PA
    CG9572-PB
    CG9572-PD
    aspr-PA
    aspr-PB
    aspr-PD

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_004354.4 Reference assembly

      Range
      20148124..20155514
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_134528.3 → NP_608372.1  asperous, isoform A [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_608372.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9W5X1
      Related
      FBpp0070005

    2. NM_001201748.3 → NP_001188677.2  asperous, isoform D [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001188677.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      M9MSF5

    3. NM_001201747.2 → NP_001188676.1  asperous, isoform B [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001188676.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      E8NH67
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    E8NH67 E8NH67
    M9MSF5 M9MSF5
    Q9W5X1 Q9W5X1

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Other Literature Sources
    Molecular Biology Databases
    Research Materials
    Tools