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    CG42565 uncharacterized protein [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 37598, updated on 9-Dec-2024

    Summary

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    Official Symbol
    CG42565provided by FlyBase
    Official Full Name
    uncharacterized proteinprovided by FlyBase
    Primary source
    FLYBASE:FBgn0260767
    Locus tag
    Dmel_CG42565
    See related
    AllianceGenome:FB:FBgn0260767
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    CG13512; Dmel\CG42565
    Old locus tag
    Dmel_CG13512
    Summary
    Predicted to enable zinc ion binding activity. [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    all
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    Genomic context

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    See CG42565 in Genome Data Viewer
    Location:
    58F4-58F4; 2-100 cM
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 2R NT_033778.4 (22657901..22661389)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 2R NT_033778.3 (18545406..18548894)

    Chromosome 2R - NT_033778.4Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene antisense RNA:CR45268 Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Fighting fly genes. Robin C, et al. Trends Genet, 2007 Feb. PMID 17188395
    2. Parallel and population-specific gene regulatory evolution in cold-adapted fly populations. Huang Y, et al. Genetics, 2021 Jul 14. PMID 33989401, Free PMC Article
    3. Evolutionary changes in cis and trans gene regulation. Wittkopp PJ, et al. Nature, 2004 Jul 1. PMID 15229602
    4. DmGTSF1 is necessary for Piwi-piRISC-mediated transcriptional transposon silencing in the Drosophila ovary. Ohtani H, et al. Genes Dev, 2013 Aug 1. PMID 23913921, Free PMC Article
    5. Spatial and temporal control of gene expression in Drosophila using the inducible GeneSwitch GAL4 system. I. Screen for larval nervous system drivers. Nicholson L, et al. Genetics, 2008 Jan. PMID 18202369, Free PMC Article

    See all (32) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by FlyBase

    Function Evidence Code Pubs
    enables zinc ion binding IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
    		  

    General protein information

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    Preferred Names
    uncharacterized protein
    Names
    CG42565-PA
    CG42565-PB

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033778.4 Reference assembly

      Range
      22657901..22661389
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001299809.1 → NP_001286738.1  uncharacterized protein Dmel_CG42565, isoform B [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001286738.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9W219
      Conserved Domains (1) summary
      pfam10601
      Location:72 → 135
      zf-LITAF-like; LITAF-like zinc ribbon domain

    2. NM_137858.3 → NP_611702.1  uncharacterized protein Dmel_CG42565, isoform A [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_611702.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9W219
      Related
      FBpp0290484
      Conserved Domains (1) summary
      pfam10601
      Location:72 → 135
      zf-LITAF-like; LITAF-like zinc ribbon domain
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9W219 Q9W219

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

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