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    Ocho ocho [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 39621, updated on 9-Dec-2024

    Summary

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    Official Symbol
    Ochoprovided by FlyBase
    Official Full Name
    ochoprovided by FlyBase
    Primary source
    FLYBASE:FBgn0040296
    Locus tag
    Dmel_CG3396
    See related
    AllianceGenome:FB:FBgn0040296
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    CG3396; CG5138; DmelCG3396; Dmel\CG3396; ocho
    Summary
    Enables ubiquitin protein ligase binding activity. Predicted to be involved in negative regulation of Notch signaling pathway. Is expressed in several structures, including anlage in statu nascendi; antennal anlage; antennal primordium; central brain anlage; and head epidermis primordium. [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    all
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    Genomic context

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    See Ocho in Genome Data Viewer
    Location:
    71A4-71A4; 3-42 cM
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 3L NT_037436.4 (14974848..14976040)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3L NT_037436.3 (14967948..14969140)

    Chromosome 3L - NT_037436.4Genomic Context describing neighboring genes Neighboring gene Twin of m4 Neighboring gene Bearded Neighboring gene long non-coding RNA:marge Neighboring gene uncharacterized protein

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by FlyBase

    Function Evidence Code Pubs
    enables ubiquitin protein ligase binding IPI
    Inferred from Physical Interaction
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in Notch signaling pathway IEA
    Inferred from Electronic Annotation
    more info
    		  
    involved_in negative regulation of Notch signaling pathway ISS
    Inferred from Sequence or Structural Similarity
    more info
    		 PubMed 
    involved_in sensory organ development IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    ocho
    Names
    CG3396-PB
    CG3396-PC
    Ocho-PB
    Ocho-PC

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_037436.4 Reference assembly

      Range
      14974848..14976040
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_080514.2 → NP_536775.2  ocho, isoform B [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_536775.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      C9QPG2, Q9VUI5, Q9VUI6
      Conserved Domains (1) summary
      pfam15952
      Location:9 → 149
      ESM4; Enhancer of split M4 family

    2. NM_001259830.1 → NP_001246759.1  ocho, isoform C [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001246759.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      C9QPG2, Q9VUI5, Q9VUI6
      Conserved Domains (1) summary
      pfam15952
      Location:9 → 149
      ESM4; Enhancer of split M4 family
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9VUI5 Q9VUI5

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Other Literature Sources
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