U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    Rcd2 Reduction in Cnn dots 2 [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 40283, updated on 9-Dec-2024

    Summary

    Go to the top of the page Help
    Official Symbol
    Rcd2provided by FlyBase
    Official Full Name
    Reduction in Cnn dots 2provided by FlyBase
    Primary source
    FLYBASE:FBgn0037012
    Locus tag
    Dmel_CG4786
    See related
    AllianceGenome:FB:FBgn0037012
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    CG4786; CT15369; Dmel\CG4786
    Summary
    Involved in centriole replication. Located in plasma membrane. [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    all
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See Rcd2 in Genome Data Viewer
    Location:
    77C7-77D1; 3-47 cM
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 3L NT_037436.4 (20527972..20540417, complement)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3L NT_037436.3 (20521072..20533517, complement)

    Chromosome 3L - NT_037436.4Genomic Context describing neighboring genes Neighboring gene Phosphatidylserine synthase Neighboring gene NUBP iron-sulfur cluster assembly factor 2 Neighboring gene uncharacterized protein Neighboring gene long non-coding RNA:CR46326 Neighboring gene long noncoding RNA: testis-specific 3

    Genomic regions, transcripts, and products

    Go to the top of the page Help

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. A genome-wide RNAi screen to dissect centriole duplication and centrosome maturation in Drosophila. Dobbelaere J, et al. PLoS Biol, 2008 Sep 16. PMID 18798690, Free PMC Article
    2. The genetic basis of natural variation in mushroom body size in Drosophila melanogaster. Zwarts L, et al. Nat Commun, 2015 Dec 11. PMID 26656654, Free PMC Article
    3. Genome-wide association analysis of oxidative stress resistance in Drosophila melanogaster. Weber AL, et al. PLoS One, 2012. PMID 22496853, Free PMC Article
    4. Drosophila muller f elements maintain a distinct set of genomic properties over 40 million years of evolution. Leung W, et al. G3 (Bethesda), 2015 Mar 4. PMID 25740935, Free PMC Article
    5. mRNA-Associated Processes and Their Influence on Exon-Intron Structure in Drosophila melanogaster. Lepennetier G, et al. G3 (Bethesda), 2016 Jun 1. PMID 27172210, Free PMC Article

    See all (22) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

    Go to the top of the page Help
    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Go to the top of the page Help

    Homology

    Gene Ontology Provided by FlyBase

    Process Evidence Code Pubs
    involved_in centriole replication IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in plasma membrane IDA
    Inferred from Direct Assay
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    reduction in Cnn dots 2
    Names
    CG4786-PA
    Rcd2-PA

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_037436.4 Reference assembly

      Range
      20527972..20540417 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_140987.3 → NP_649244.3  reduction in Cnn dots 2 [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_649244.3

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q8SXY5, Q9VPD1
      Related
      FBpp0077871
      Conserved Domains (1) summary
      smart00214
      Location:114 → 168
      VWC; von Willebrand factor (vWF) type C domain
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q8SXY5 Q8SXY5

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases
    Research Materials
    Tools