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    CG1172 uncharacterized protein [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 40647, updated on 9-Dec-2024

    Summary

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    Official Symbol
    CG1172provided by FlyBase
    Official Full Name
    uncharacterized proteinprovided by FlyBase
    Primary source
    FLYBASE:FBgn0264712
    Locus tag
    Dmel_CG1172
    See related
    AllianceGenome:FB:FBgn0264712
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    CC1172; CR43473; Dmel\CG1172
    Old locus tag
    Dmel_CR43473
    Summary
    Is expressed in adult head and organism. Orthologous to human UBTD1 (ubiquitin domain containing 1) and UBTD2 (ubiquitin domain containing 2). [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    all
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    Genomic context

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    See CG1172 in Genome Data Viewer
    Location:
    83A1-83A1; 3-47.5 cM
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 3R NT_033777.3 (5393922..5399510)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3R NT_033777.2 (1219644..1225232)

    Chromosome 3R - NT_033777.3Genomic Context describing neighboring genes Neighboring gene krotzkopf verkehrt Neighboring gene transfer RNA:Arginine-TCG 4-1 Neighboring gene uncharacterized protein Neighboring gene Odorant receptor 83a Neighboring gene uncharacterized protein Neighboring gene Odorant receptor co-receptor

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genome-wide analysis of mRNAs regulated by Drosha and Argonaute proteins in Drosophila melanogaster. Rehwinkel J, et al. Mol Cell Biol, 2006 Apr. PMID 16581772, Free PMC Article
    2. Ribosome profiling reveals pervasive and regulated stop codon readthrough in Drosophila melanogaster. Dunn JG, et al. Elife, 2013 Dec 3. PMID 24302569, Free PMC Article
    3. Genes conserved in bilaterians but jointly lost with Myc during nematode evolution are enriched in cell proliferation and cell migration functions. Erives AJ. Dev Genes Evol, 2015 Sep. PMID 26173873, Free PMC Article
    4. Next-generation large-scale binary protein interaction network for Drosophila melanogaster. Tang HW, et al. Nat Commun, 2023 Apr 15. PMID 37061542, Free PMC Article
    5. Genome-wide phenotypic RNAi screen in the Drosophila wing: phenotypic description of functional classes. López-Varea A, et al. G3 (Bethesda), 2021 Dec 8. PMID 34599810, Free PMC Article

    See all (24) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by FlyBase

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
    		  

    General protein information

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    Preferred Names
    uncharacterized protein
    Names
    CG1172-PA
    CG1172-PB
    CG1172-PC

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033777.3 Reference assembly

      Range
      5393922..5399510
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001275351.2 → NP_001262280.1  uncharacterized protein Dmel_CG1172, isoform C [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001262280.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9VNB2
      Conserved Domains (3) summary
      cd01794
      Location:164 → 233
      DC_UbP_C; dendritic cell derived ubiquitin-like protein
      smart00213
      Location:161 → 232
      UBQ; Ubiquitin homologues
      pfam16455
      Location:37 → 141
      UBD; Ubiquitin-binding domain

    2. NM_001260002.2 → NP_001246931.1  uncharacterized protein Dmel_CG1172, isoform B [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001246931.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9VNB2
      Conserved Domains (3) summary
      cd01794
      Location:164 → 233
      DC_UbP_C; dendritic cell derived ubiquitin-like protein
      smart00213
      Location:161 → 232
      UBQ; Ubiquitin homologues
      pfam16455
      Location:37 → 141
      UBD; Ubiquitin-binding domain

    3. NM_141277.5 → NP_649534.1  uncharacterized protein Dmel_CG1172, isoform A [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_649534.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9VNB2
      Related
      FBpp0078436
      Conserved Domains (3) summary
      cd01794
      Location:164 → 233
      DC_UbP_C; dendritic cell derived ubiquitin-like protein
      smart00213
      Location:161 → 232
      UBQ; Ubiquitin homologues
      pfam16455
      Location:37 → 141
      UBD; Ubiquitin-binding domain
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9VNB2 Q9VNB2

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