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    BomT2 Bomanin Tailed 2 [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 50208, updated on 9-Dec-2024

    Summary

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    Official Symbol
    BomT2provided by FlyBase
    Official Full Name
    Bomanin Tailed 2provided by FlyBase
    Primary source
    FLYBASE:FBgn0040735
    Locus tag
    Dmel_CG16836
    See related
    AllianceGenome:FB:FBgn0040735
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    Bom836; CG16836; Dmel\CG16836
    Summary
    Predicted to be involved in defense response. [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    all
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    Genomic context

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    See BomT2 in Genome Data Viewer
    Location:
    55C4-55C4; 2-85 cM
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 2R NT_033778.4 (18388995..18389443)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 2R NT_033778.3 (14276500..14276948)

    Chromosome 2R - NT_033778.4Genomic Context describing neighboring genes Neighboring gene Bomanin Short 2 Neighboring gene Bomanin Short 3 Neighboring gene Bomanin Short 5 Neighboring gene Bomanin Short 6

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Recurrent evolution of high virulence in isolated populations of a DNA virus. Hill T, et al. Elife, 2020 Oct 28. PMID 33112738, Free PMC Article
    2. Short-Form Bomanins Mediate Humoral Immunity in Drosophila. Lindsay SA, et al. J Innate Immun, 2018. PMID 29920489, Free PMC Article
    3. An effector Peptide family required for Drosophila toll-mediated immunity. Clemmons AW, et al. PLoS Pathog, 2015 Apr. PMID 25915418, Free PMC Article
    4. Shortened lifespan induced by a high-glucose diet is associated with intestinal immune dysfunction in Drosophila sechellia. Abe M, et al. J Exp Biol, 2022 Nov 1. PMID 36226701, Free PMC Article
    5. Large clusters of co-expressed genes in the Drosophila genome. Boutanaev AM, et al. Nature, 2002 Dec 12. PMID 12478293

    See all (57) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by FlyBase

    Process Evidence Code Pubs
    involved_in defense response IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    bomanin tailed 2
    Names
    BomT2-PA
    CG16836-PA
    bomanin 836
    bomanin T2

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033778.4 Reference assembly

      Range
      18388995..18389443
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_144110.2 → NP_652367.1  bomanin tailed 2 [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_652367.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      A1ZB62, D4G7G1
      Related
      FBpp0085847
      Conserved Domains (1) summary
      pfam08194
      Location:1 → 37
      DIM; DIM protein
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    A1ZB62.1 A1ZB62

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