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    CG42268 uncharacterized protein [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 39145, updated on 9-Dec-2024

    Summary

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    Official Symbol
    CG42268provided by FlyBase
    Official Full Name
    uncharacterized proteinprovided by FlyBase
    Primary source
    FLYBASE:FBgn0259163
    Locus tag
    Dmel_CG42268
    See related
    AllianceGenome:FB:FBgn0259163
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    CG14170; CG32044; CG32046; CG6740; Dmel\CG42268
    Old locus tag
    Dmel_CG32044; Dmel_CG32046
    Summary
    Is expressed in several structures, including clypeo-labral primordium; embryonic dorsal epidermis; embryonic epipharynx; ganglia; and gut section. [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    all
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    Genomic context

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    See CG42268 in Genome Data Viewer
    Location:
    67C6-67C7; 3-31 cM
    Exon count:
    18
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 3L NT_037436.4 (9734012..9760395, complement)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3L NT_037436.3 (9727112..9753495, complement)

    Chromosome 3L - NT_037436.4Genomic Context describing neighboring genes Neighboring gene ATP synthase, subunit B Neighboring gene uncharacterized protein Neighboring gene mir-4986 stem loop Neighboring gene long non-coding RNA:CR44348 Neighboring gene long non-coding RNA:CR45407 Neighboring gene Anion exchanger 2

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Natural variation in the regulation of neurodevelopmental genes modifies flight performance in Drosophila. Spierer AN, et al. PLoS Genet, 2021 Mar. PMID 33735180, Free PMC Article
    2. Gene-by-temperature interactions and candidate plasticity genes for morphological traits in Drosophila melanogaster. Carreira VP, et al. PLoS One, 2013. PMID 23936253, Free PMC Article
    3. Misexpression screen delineates novel genes controlling Drosophila lifespan. Paik D, et al. Mech Ageing Dev, 2012 May. PMID 22366109, Free PMC Article
    4. Dissecting differential gene expression within the circadian neuronal circuit of Drosophila. Nagoshi E, et al. Nat Neurosci, 2010 Jan. PMID 19966839, Free PMC Article
    5. Genetic basis of wing morphogenesis in Drosophila: sexual dimorphism and non-allometric effects of shape variation. Carreira VP, et al. BMC Dev Biol, 2011 Jun 2. PMID 21635778, Free PMC Article

    See all (32) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    General protein information

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    Preferred Names
    uncharacterized protein
    Names
    CG42268-PD
    CG42268-PF
    CG42268-PH
    CG42268-PI
    CG42268-PJ
    CG42268-PL
    CG42268-PM
    CG42268-PN
    CG42268-PO

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_037436.4 Reference assembly

      Range
      9734012..9760395 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001274719.1 → NP_001261648.1  uncharacterized protein Dmel_CG42268, isoform I [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001261648.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      M9PEP9

    2. NM_168368.2 → NP_729544.2  uncharacterized protein Dmel_CG42268, isoform D [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_729544.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9VT47

    3. NM_168366.4 → NP_729542.4  uncharacterized protein Dmel_CG42268, isoform H [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_729542.4

      Status: REVIEWED

      UniProtKB/TrEMBL
      B7FNK2, Q8IQC8, Q960H7

    4. NM_001382084.1 → NP_001369042.1  uncharacterized protein Dmel_CG42268, isoform O [Drosophila melanogaster]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A6M3QGB1, Q960H7

    5. NM_001274723.1 → NP_001261652.1  uncharacterized protein Dmel_CG42268, isoform M [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001261652.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      M9PC19, Q960H7

    6. NM_168367.1 → NP_729543.1  uncharacterized protein Dmel_CG42268, isoform F [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_729543.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q960H7, Q9VT45
      Related
      FBpp0288882, FBtr0299607

    7. NM_001274722.1 → NP_001261651.1  uncharacterized protein Dmel_CG42268, isoform L [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001261651.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      M9PHX5, Q960H7

    8. NM_001274720.1 → NP_001261649.1  uncharacterized protein Dmel_CG42268, isoform J [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001261649.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      M9PF51, Q8SXS6

    9. NM_001274721.2 → NP_001261650.2  uncharacterized protein Dmel_CG42268, isoform N [Drosophila melanogaster]

      Status: REVIEWED

      UniProtKB/TrEMBL
      M9PEZ3
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    A0A6M3QGB1 A0A6M3QGB1
    M9PC19 M9PC19
    M9PEP9 M9PEP9
    M9PEZ3 M9PEZ3
    M9PF51 M9PF51
    M9PHX5 M9PHX5
    Q8IQC8 Q8IQC8
    Q8SXS6 Q8SXS6
    Q960H7 Q960H7
    Q9VT45 Q9VT45
    Q9VT47 Q9VT47

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