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    CG42749 uncharacterized protein [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 31438, updated on 9-Dec-2024

    Summary

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    Official Symbol
    CG42749provided by FlyBase
    Official Full Name
    uncharacterized proteinprovided by FlyBase
    Primary source
    FLYBASE:FBgn0261803
    Locus tag
    Dmel_CG42749
    See related
    AllianceGenome:FB:FBgn0261803
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    CG15785; CG15786; Dmel\CG42749
    Old locus tag
    Dmel_CG15785; Dmel_CG15786
    Summary
    Is expressed in antennal primordium; embryonic antennal sense organ; and embryonic/larval tracheal section. [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    all
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    Genomic context

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    See CG42749 in Genome Data Viewer
    Location:
    4F4-4F4; 1-11 cM
    Exon count:
    8
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) X NC_004354.4 (5296066..5306288)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) X NC_004354.3 (5190099..5200321)

    Chromosome X - NC_004354.4Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene rugose Neighboring gene long non-coding RNA:CR44834 Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene Cyclin-dependent kinase 7 Neighboring gene sans fille

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. The discovery of novel LPMO families with a new Hidden Markov model. Voshol GP, et al. BMC Res Notes, 2017 Feb 21. PMID 28222763, Free PMC Article
    2. Identification of FGF-dependent genes in the Drosophila tracheal system. Stahl M, et al. Gene Expr Patterns, 2007 Jan. PMID 16949886
    3. The female-specific doublesex isoform regulates pleiotropic transcription factors to pattern genital development in Drosophila. Chatterjee SS, et al. Development, 2011 Mar. PMID 21343364
    4. Gene expression profiling of Drosophila tracheal fusion cells. Chandran RR, et al. Gene Expr Patterns, 2014 Jul. PMID 24928808
    5. Microarray comparison of anterior and posterior Drosophila wing imaginal disc cells identifies novel wing genes. Ibrahim DM, et al. G3 (Bethesda), 2013 Aug 7. PMID 23749451, Free PMC Article

    See all (30) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    General protein information

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    Preferred Names
    uncharacterized protein
    Names
    CG42749-PB
    CG42749-PC
    CG42749-PD

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_004354.4 Reference assembly

      Range
      5296066..5306288
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001297951.1 → NP_001284880.1  uncharacterized protein Dmel_CG42749, isoform D [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001284880.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      M9MS70
      Conserved Domains (1) summary
      pfam03067
      Location:35 → 226
      Chitin_bind_3; Chitin binding domain

    2. NM_001201616.2 → NP_001188545.1  uncharacterized protein Dmel_CG42749, isoform C [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001188545.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      M9MS70
      Conserved Domains (1) summary
      pfam03067
      Location:35 → 226
      Chitin_bind_3; Chitin binding domain

    3. NM_131981.3 → NP_572209.1  uncharacterized protein Dmel_CG42749, isoform B [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_572209.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q8MS32, Q9W4E1
      Related
      FBpp0292370
      Conserved Domains (1) summary
      pfam03067
      Location:35 → 226
      Chitin_bind_3; Chitin binding domain
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    M9MS70 M9MS70
    Q8MS32 Q8MS32
    Q9W4E1 Q9W4E1

    Gene LinkOut

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