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    Nup93-2 Nucleoporin 93kD-2 [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 41804, updated on 9-Dec-2024

    Summary

    Official Symbol
    Nup93-2provided by FlyBase
    Official Full Name
    Nucleoporin 93kD-2provided by FlyBase
    Primary source
    FLYBASE:FBgn0038274
    Locus tag
    Dmel_CG7262
    See related
    AllianceGenome:FB:FBgn0038274
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    Cg7262; CG7262; Dmel\CG7262; nup93; Nup93; nup93-2; Nup93-like
    Summary
    Predicted to be a structural constituent of nuclear pore. Predicted to be involved in nuclear pore organization; poly(A)+ mRNA export from nucleus; and protein import into nucleus. Predicted to be part of nuclear pore nuclear basket. Is expressed in several structures, including adult head; anterior endoderm; embryonic/larval midgut primordium; ganglia; and mesoderm. Used to study nephrotic syndrome type 12. Human ortholog(s) of this gene implicated in nephrotic syndrome type 12. Orthologous to human NUP93 (nucleoporin 93). [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
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    Genomic context

    See Nup93-2 in Genome Data Viewer
    Location:
    88D6-88D6; 3-56 cM
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 3R NT_033777.3 (14895703..14898372, complement)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3R NT_033777.2 (10721425..10724094, complement)

    Chromosome 3R - NT_033777.3Genomic Context describing neighboring genes Neighboring gene Ubiquinol-cytochrome c reductase core protein 1 Neighboring gene Diphthamide biosynthesis 2 Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene Vacuolar H[+] ATPase PPA1 subunit 2 Neighboring gene Ribosomal protein S5b

    Genomic regions, transcripts, and products

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Gene Ontology Provided by FlyBase

    Function Evidence Code Pubs
    enables structural constituent of nuclear pore IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables structural constituent of nuclear pore IEA
    Inferred from Electronic Annotation
    more info
     
    enables structural constituent of nuclear pore ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    Process Evidence Code Pubs
    involved_in nuclear pore organization ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    involved_in poly(A)+ mRNA export from nucleus IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in protein import into nucleus IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    Component Evidence Code Pubs
    part_of nuclear pore IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    part_of nuclear pore IEA
    Inferred from Electronic Annotation
    more info
     
    part_of nuclear pore nuclear basket ISS
    Inferred from Sequence or Structural Similarity
    more info
     

    General protein information

    Preferred Names
    nucleoporin 93kD-2
    Names
    CG7262-PA
    Nup93-2-PA
    nucleoporin 93

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033777.3 Reference assembly

      Range
      14895703..14898372 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_142147.4NP_650404.1  nucleoporin 93kD-2 [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_650404.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9VFE7
      Related
      FBpp0082467
      Conserved Domains (2) summary
      pfam04097
      Location:213781
      Nic96; Nup93/Nic96
      cl02374
      Location:178238
      DUF2461; Conserved hypothetical protein (DUF2461)