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    Hacd1 3-hydroxyacyl-CoA dehydratase 1 [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 34614, updated on 9-Dec-2024

    Summary

    Official Symbol
    Hacd1provided by FlyBase
    Official Full Name
    3-hydroxyacyl-CoA dehydratase 1provided by FlyBase
    Primary source
    FLYBASE:FBgn0032394
    Locus tag
    Dmel_CG6746
    See related
    AllianceGenome:FB:FBgn0032394
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    CG6746; Dmel\CG6746; hacd1; HADC[CG6746]
    Summary
    Predicted to enable enzyme binding activity and very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase activity. Predicted to be involved in fatty acid elongation; sphingolipid biosynthetic process; and very long-chain fatty acid biosynthetic process. Predicted to be located in endoplasmic reticulum. Predicted to be active in endoplasmic reticulum membrane. Is expressed in several structures, including adult head; adult heart; embryonic dorsal epidermis; embryonic head epidermis; and gut section. Human ortholog(s) of this gene implicated in congenital myopathy. Orthologous to human HACD1 (3-hydroxyacyl-CoA dehydratase 1) and HACD2 (3-hydroxyacyl-CoA dehydratase 2). [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
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    Genomic context

    See Hacd1 in Genome Data Viewer
    Location:
    33B5-33B6; 2-45 cM
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 2L NT_033779.5 (12001234..12002266, complement)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 2L NT_033779.4 (12001234..12002266, complement)

    Chromosome 2L - NT_033779.5Genomic Context describing neighboring genes Neighboring gene Quetzalcoatl Neighboring gene transcriptional Adaptor 1-1 Neighboring gene uncharacterized protein Neighboring gene Nfs1 cysteine desulfurase Neighboring gene Rhodopsin 5 Neighboring gene long non-coding RNA:CR44588

    Genomic regions, transcripts, and products

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Gene Ontology Provided by FlyBase

    Function Evidence Code Pubs
    enables 3-hydroxyacyl-CoA dehydratase activity IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables enzyme binding ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    enables very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase activity ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    Process Evidence Code Pubs
    involved_in fatty acid elongation IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in fatty acid elongation ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    involved_in sphingolipid biosynthetic process IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in very long-chain fatty acid biosynthetic process IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    Component Evidence Code Pubs
    located_in endoplasmic reticulum ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    is_active_in endoplasmic reticulum membrane IBA
    Inferred from Biological aspect of Ancestor
    more info
     

    General protein information

    Preferred Names
    3-hydroxyacyl-CoA dehydratase 1
    Names
    CG6746-PA
    Hacd1-PA
    NP_609534.1

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033779.5 Reference assembly

      Range
      12001234..12002266 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_135690.3NP_609534.1  3-hydroxyacyl-CoA dehydratase 1 [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_609534.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9VKD2
      Related
      FBpp0079897
      Conserved Domains (1) summary
      pfam04387
      Location:73232
      PTPLA; Protein tyrosine phosphatase-like protein, PTPLA