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    CG8420 uncharacterized protein [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 41097, updated on 9-Dec-2024

    Summary

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    Official Symbol
    CG8420provided by FlyBase
    Official Full Name
    uncharacterized proteinprovided by FlyBase
    Primary source
    FLYBASE:FBgn0037664
    Locus tag
    Dmel_CG8420
    See related
    AllianceGenome:FB:FBgn0037664
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    anon-WO0140519.182; Dmel\CG8420
    Summary
    Involved in sexual reproduction. Predicted to be located in extracellular space. Is expressed in adult head and embryonic/larval tracheal section. [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    all
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    Genomic context

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    See CG8420 in Genome Data Viewer
    Location:
    85D2-85D4; 3-48 cM
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 3R NT_033777.3 (9246649..9251431)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3R NT_033777.2 (5072371..5077153)

    Chromosome 3R - NT_033777.3Genomic Context describing neighboring genes Neighboring gene D1 chromosomal protein Neighboring gene Vacuolar protein sorting 15 Neighboring gene Sulfotransferase 2 Neighboring gene pseudo

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Deep sequencing of the prothoracic gland transcriptome reveals new players in insect ecdysteroidogenesis. Nakaoka T, et al. PLoS One, 2017. PMID 28257485, Free PMC Article
    2. The conserved microRNA miR-8 tunes atrophin levels to prevent neurodegeneration in Drosophila. Karres JS, et al. Cell, 2007 Oct 5. PMID 17923093
    3. Evolutionary rate covariation identifies new members of a protein network required for Drosophila melanogaster female post-mating responses. Findlay GD, et al. PLoS Genet, 2014 Jan. PMID 24453993, Free PMC Article
    4. E(var)3-9 of Drosophila melanogaster encodes a zinc finger protein. Weiler KS. Genetics, 2007 Sep. PMID 17660546, Free PMC Article
    5. A Genome-Wide Screen for Dendritically Localized RNAs Identifies Genes Required for Dendrite Morphogenesis. Misra M, et al. G3 (Bethesda), 2016 Aug 9. PMID 27260999, Free PMC Article

    See all (36) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by FlyBase

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in sexual reproduction IEP
    Inferred from Expression Pattern
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in extracellular space ISM
    Inferred from Sequence Model
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    uncharacterized protein
    Names
    CG8420-PA
    CG8420-PB

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033777.3 Reference assembly

      Range
      9246649..9251431
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001275477.1 → NP_001262406.1  uncharacterized protein Dmel_CG8420, isoform B [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001262406.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A0B4KGJ8

    2. NM_141612.3 → NP_649869.1  uncharacterized protein Dmel_CG8420, isoform A [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_649869.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9VHH1
      Related
      FBpp0081453
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    A0A0B4KGJ8 A0A0B4KGJ8
    Q9VHH1 Q9VHH1

    Gene LinkOut

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