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    TRR4 [ Saccharomyces cerevisiae S288C ]

    Gene ID: 851057, updated on 9-Dec-2024

    Summary

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    Official Symbol
    TRR4
    Primary source
    SGD:S000006706
    Locus tag
    YNCL0045W
    See related
    AllianceGenome:SGD:S000006706
    Gene type
    tRNA
    Organism
    Saccharomyces cerevisiae S288C (strain: S288C)
    Lineage
    Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces
    Summary
    Predicted to enable triplet codon-amino acid adaptor activity. Predicted to be involved in translational elongation. Predicted to be located in cytosol. [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

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    See TRR4 in Genome Data Viewer
    Location:
    chromosome: XII
    Sequence:
    Chromosome: XII; NC_001144.5 (818609..818680)

    Chromosome XII - NC_001144.5Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene 1,3-beta-glucanosyltransferase Neighboring gene ribosomal 60S subunit protein L26A Neighboring gene bifunctional fructose-2,6-bisphosphate 2-phosphatase/6-phosphofructo-2-kinase

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_001144.5

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. The Enzymatic Paradox of Yeast Arginyl-tRNA Synthetase: Exclusive Arginine Transfer Controlled by a Flexible Mechanism of tRNA Recognition. McShane A, et al. PLoS One, 2016. PMID 26844776, Free PMC Article
    2. A yeast arginine specific tRNA is a remnant aspartate acceptor. Fender A, et al. Nucleic Acids Res, 2004. PMID 15452274, Free PMC Article
    3. A La protein requirement for efficient pre-tRNA folding. Chakshusmathi G, et al. EMBO J, 2003 Dec 15. PMID 14657028, Free PMC Article
    4. An intrinsically disordered C terminus allows the La protein to assist the biogenesis of diverse noncoding RNA precursors. Kucera NJ, et al. Proc Natl Acad Sci U S A, 2011 Jan 25. PMID 21212361, Free PMC Article
    5. The La protein functions redundantly with tRNA modification enzymes to ensure tRNA structural stability. Copela LA, et al. RNA, 2006 Apr. PMID 16581807, Free PMC Article

    See all (14) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    • Arginine tRNA (tRNA-Arg), predicted by tRNAscan-SE analysis; single essential nuclear tRNA gene containing the tDNA-anticodon CCG (presumably CCG in the mature tRNA), decodes CGG codons into arginine, one of 19 nuclear tRNAs for arginine; correct folding and efficient aminoacylation require Lhp1p

    Gene Ontology Provided by SGD

    Function Evidence Code Pubs
    enables triplet codon-amino acid adaptor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables triplet codon-amino acid adaptor activity ISM
    Inferred from Sequence Model
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in translation IEA
    Inferred from Electronic Annotation
    more info
    		  
    involved_in translational elongation IC
    Inferred by Curator
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytosol IC
    Inferred by Curator
    more info
    		 PubMed 

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