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    M60.7 SOCS box domain-containing protein [ Caenorhabditis elegans ]

    Gene ID: 187467, updated on 9-Dec-2024

    Summary

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    Official Symbol
    M60.7
    Official Full Name
    SOCS box domain-containing protein
    Primary source
    WormBase:WBGene00019782
    Locus tag
    CELE_M60.7
    See related
    AllianceGenome:WB:WBGene00019782
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Predicted to be involved in intracellular signal transduction. Orthologous to human ASB14 (ankyrin repeat and SOCS box containing 14) and ASB15 (ankyrin repeat and SOCS box containing 15). [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

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    See M60.7 in Genome Data Viewer
    Location:
    chromosome: X
    Exon count:
    8
    Sequence:
    Chromosome: X; NC_003284.9 (8257998..8261175, complement)

    Chromosome X - NC_003284.9Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ZP domain-containing protein Neighboring gene ncRNA

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003284.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by WormBase

    Process Evidence Code Pubs
    involved_in intracellular signal transduction IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    SOCS box domain-containing protein
    NP_001359992.1
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003284.9 Reference assembly

      Range
      8257998..8261175 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001373386.2 → NP_001359992.1  SOCS box domain-containing protein [Caenorhabditis elegans]

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9GYM5
      Conserved Domains (4) summary
      smart00253
      Location:424 → 465
      SOCS; suppressors of cytokine signalling
      PHA02876
      Location:64 → 366
      PHA02876; ankyrin repeat protein; Provisional
      sd00045
      Location:47 → 78
      ANK; ANK repeat [structural motif]
      cl39094
      Location:18 → 103
      Ank_2; Ankyrin repeats (3 copies)
    Nucleotide Protein
    Heading Accession and Version

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