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    • Showing Current items.

    F54D5.9 F-box domain-containing protein [ Caenorhabditis elegans ]

    Gene ID: 174766, updated on 9-Dec-2024

    Summary

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    Official Symbol
    F54D5.9
    Official Full Name
    F-box domain-containing protein
    Primary source
    WormBase:WBGene00010053
    Locus tag
    CELE_F54D5.9
    See related
    AllianceGenome:WB:WBGene00010053
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Orthologous to human FBXO47 (F-box protein 47). [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

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    See F54D5.9 in Genome Data Viewer
    Location:
    chromosome: II
    Exon count:
    6
    Sequence:
    Chromosome: II; NC_003280.10 (11542636..11544828, complement)

    Chromosome II - NC_003280.10Genomic Context describing neighboring genes Neighboring gene D-2-hydroxyglutarate dehydrogenase, mitochondrial Neighboring gene Transcription initiation factor IIE subunit beta Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene J domain-containing protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003280.10

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Integrating interactome, phenome, and transcriptome mapping data for the C. elegans germline. Walhout AJ, et al. Curr Biol, 2002 Nov 19. PMID 12445390
    2. Empirically controlled mapping of the Caenorhabditis elegans protein-protein interactome network. Simonis N, et al. Nat Methods, 2009 Jan. PMID 19123269, Free PMC Article
    3. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by WormBase

    Function Evidence Code Pubs
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    F-box domain-containing protein
    NP_496467.1
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003280.10 Reference assembly

      Range
      11542636..11544828 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_064066.6 → NP_496467.1  F-box domain-containing protein [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_496467.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q20775
    Nucleotide Protein
    Heading Accession and Version

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