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    txt-4 Fungal lipase-like domain-containing protein [ Caenorhabditis elegans ]

    Gene ID: 176959, updated on 9-Dec-2024

    Summary

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    Official Symbol
    txt-4
    Official Full Name
    Fungal lipase-like domain-containing protein
    Primary source
    WormBase:WBGene00019368
    Locus tag
    CELE_K03H6.2
    See related
    AllianceGenome:WB:WBGene00019368
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Predicted to be involved in lipid metabolic process. [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

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    See txt-4 in Genome Data Viewer
    Location:
    chromosome: IV
    Exon count:
    8
    Sequence:
    Chromosome: IV; NC_003282.8 (1510564..1515457)

    Chromosome IV - NC_003282.8Genomic Context describing neighboring genes Neighboring gene Protein SEC13 homolog Neighboring gene Phosphotransferase Neighboring gene ncRNA Neighboring gene tRNA-Asp Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene C-type lectin domain-containing protein Neighboring gene G_PROTEIN_RECEP_F1_2 domain-containing protein Neighboring gene G-protein coupled receptors family 1 profile domain-containing protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003282.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. RNA targets and specificity of Staufen, a double-stranded RNA-binding protein in Caenorhabditis elegans. LeGendre JB, et al. J Biol Chem, 2013 Jan 25. PMID 23195953, Free PMC Article
    2. A map of the interactome network of the metazoan C. elegans. Li S, et al. Science, 2004 Jan 23. PMID 14704431, Free PMC Article
    3. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by WormBase

    Process Evidence Code Pubs
    involved_in lipid metabolic process IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    Fungal lipase-like domain-containing protein
    NP_001368234.1
    • Confirmed by transcript evidence
    NP_500090.3
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003282.8 Reference assembly

      Range
      1510564..1515457
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_067689.6 → NP_500090.3  Fungal lipase-like domain-containing protein [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_500090.3

      Status: REVIEWED

      UniProtKB/TrEMBL
      O61218
      Conserved Domains (1) summary
      pfam01764
      Location:132 → 268
      Lipase_3; Lipase (class 3)

    2. NM_001380046.1 → NP_001368234.1  Fungal lipase-like domain-containing protein [Caenorhabditis elegans]

      Status: REVIEWED

      UniProtKB/TrEMBL
      U4PBG9
      Conserved Domains (1) summary
      cl21494
      Location:1 → 44
      Abhydrolase; alpha/beta hydrolases
    Nucleotide Protein
    Heading Accession and Version

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