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    glc-4 Glutamate-gated ChLoride channel [ Caenorhabditis elegans ]

    Gene ID: 182971, updated on 27-Dec-2024

    Summary

    Official Symbol
    glc-4
    Official Full Name
    Glutamate-gated ChLoride channel
    Primary source
    WormBase:WBGene00001594
    Locus tag
    CELE_C27H5.8
    See related
    AllianceGenome:WB:WBGene00001594
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Predicted to enable excitatory extracellular ligand-gated monoatomic ion channel activity. Predicted to contribute to chloride channel activity. Predicted to be involved in chloride transmembrane transport. Predicted to be located in plasma membrane and postsynapse. Is expressed in anal depressor muscle; head mesodermal cell; intestine; and nervous system. [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

    See glc-4 in Genome Data Viewer
    Location:
    chromosome: II
    Exon count:
    8
    Sequence:
    Chromosome: II; NC_003280.10 (7172204..7174943, complement)

    Chromosome II - NC_003280.10Genomic Context describing neighboring genes Neighboring gene Cuticle collagen 36 Neighboring gene Intraflagellar transport protein 56 homolog Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene Phosphodiesterase delta-like protein

    General gene information

    Markers

    Gene Ontology Provided by WormBase

    Function Evidence Code Pubs
    contributes_to chloride channel activity IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables excitatory extracellular ligand-gated monoatomic ion channel activity IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables extracellular ligand-gated monoatomic ion channel activity IEA
    Inferred from Electronic Annotation
    more info
     
    enables monoatomic ion channel activity IEA
    Inferred from Electronic Annotation
    more info
     
    enables transmembrane signaling receptor activity IEA
    Inferred from Electronic Annotation
    more info
     
    Process Evidence Code Pubs
    involved_in chloride transmembrane transport IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in excitatory postsynaptic potential IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in monoatomic ion transmembrane transport IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in monoatomic ion transport IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in regulation of postsynaptic membrane potential IEA
    Inferred from Electronic Annotation
    more info
     
    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
     
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
     
    located_in postsynapse IEA
    Inferred from Electronic Annotation
    more info
     

    General protein information

    Preferred Names
    Glutamate-gated ChLoride channel
    NP_495489.2
    • Product from WormBase gene class glc;
      Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003280.10 Reference assembly

      Range
      7172204..7174943 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_063088.6NP_495489.2  Glutamate-gated ChLoride channel [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_495489.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q95QT7
      Conserved Domains (3) summary
      TIGR00860
      Location:26491
      LIC; Cation transporter family protein
      pfam02931
      Location:50258
      Neur_chan_LBD; Neurotransmitter-gated ion-channel ligand binding domain
      pfam02932
      Location:271488
      Neur_chan_memb; Neurotransmitter-gated ion-channel transmembrane region